Factsheet for TraesCS2B01G098600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT2G37130.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT2G37130.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G082100.1	Wheat	extracellular	95.6	96.17
TraesCS2D01G081900.1	Wheat	extracellular	94.43	94.99
TraesCS2B01G098700.1	Wheat	extracellular	93.26	94.64
TraesCS2B01G098400.1	Wheat	extracellular	93.55	94.38
HORVU2Hr1G013740.1	Barley	extracellular	35.78	93.85
TraesCS2B01G098200.1	Wheat	extracellular	86.51	92.77
TraesCS2B01G098100.1	Wheat	extracellular	89.15	91.57
TraesCS2A01G084100.1	Wheat	plastid	91.2	80.99
TraesCS2A01G083900.1	Wheat	plastid	91.2	80.99
Os07t0694300-01	Rice	cytosol, extracellular	66.28	76.61
EES18091	Sorghum	extracellular	76.54	76.54
GSMUA_Achr3P13770_001	Banana	extracellular	58.06	60.74
VIT_08s0040g02200.t01	Wine grape	extracellular	58.06	60.37
CDX79717	Canola	extracellular	58.36	60.3
CDY46756	Canola	extracellular	58.06	60.0
Bra023099.1-P	Field mustard	extracellular	58.06	60.0
CDY55434	Canola	extracellular	56.89	59.15
AT2G37130.1	Thale cress	extracellular	56.6	59.02
Bra017206.1-P	Field mustard	extracellular	56.6	58.84
Solyc09g007520.2.1	Tomato	extracellular	55.43	58.33
KRH32430	Soybean	extracellular	55.72	58.1
KRH19837	Soybean	extracellular	55.72	57.75
PGSC0003DMT400004447	Potato	extracellular	54.25	57.1
Solyc10g084240.1.1	Tomato	extracellular	53.96	55.93
PGSC0003DMT400027130	Potato	extracellular	53.08	55.02

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF11	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G098600	EnsemblPlants:TraesCS2B01G098600.1	TIGR:cd00693
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:58344589..58345734

Molecular Weight (calculated)

36539.5 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.132

Length

341 amino acids

Sequence
(BLAST)

001: MGLSSSLAPV ASALLLFCCF TAWNAAAAAA SGGGGGGLRL NYYSESCPRA EQIVKEQVRS LYEEHGNTAV SWLRALFHDC TVKSCDASLL LETDAATGLV
101: SEQASPRSFG MRNFKYVGAI KSALERECPG TVSCADLLAL AARDGAAMLG GPTAIPMRTG RRDATESQYG EVERYVPNHN DTVSAVLSRF AAMGLDAEAV
201: VALLGAHSVG RVHCSNLVAR LYPAVDGGIE PAYGAYLRGR CPTADAREDT RDVAYARNDR ATPMVLDNMY HKNLLKGRGL LLVDQRLASD PRTAPFVRRM
301: AADNGYFRET FAAALVRMSE NGPLTGGQGE VRRDCRFVNT K

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.