Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065388 | Potato | cytosol, nucleus | 3.47 | 1.89 |
| PGSC0003DMT400007294 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400076140 | Potato | cytosol, nucleus, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400065395 | EnsemblPlantsGene:PGSC0003DMG402025422 | InterPro:Helicase_HTH | PFAM:PF14493 | PGSC:PGSC0003DMG402025422 | UniParc:UPI00029516E1 |
| UniProt:M1CDW2 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402025422]
Coordinates
chr9:-:34911608..34914647
Molecular Weight (calculated)
28825.0 Da
IEP (calculated)
4.454
GRAVY (calculated)
-0.372
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MWHEDGLTFK EIANFPGRAV AIKEQTVLEY ILEAAREGCK MNWTRFCEET GLTRETFLSI QNAASKVGRE KLKPIKTELP EEVSYGQIKA YLTMQEAGVS
101: AEVFSSKSEQ SCNEDECLTE ISEVLQNSII PSDMQGDDDI VEAPGITGIN GASSPGKTEG AESHLLTEEI RKEAASSEGD FLIHKKRQRV KAAEGESFRA
201: LVATEESILS WLKNFDDGVT LSDLLEHFNG STEKSLVNLL CCLEGEFLIY RKNNLYKLL
101: AEVFSSKSEQ SCNEDECLTE ISEVLQNSII PSDMQGDDDI VEAPGITGIN GASSPGKTEG AESHLLTEEI RKEAASSEGD FLIHKKRQRV KAAEGESFRA
201: LVATEESILS WLKNFDDGVT LSDLLEHFNG STEKSLVNLL CCLEGEFLIY RKNNLYKLL
001: MSNESTNCSF FLNLFMLLLL LIFYSADACQ RECGGISIPY PFGIGKDCCL EKYYEIECRN TTSRKLVPLL SFINKEVVSI SLPSADSHFA YEVSDQERHE
101: SFGLVRVKFP ITSAGCFNDG KESGGGSKMN FTGSPFFIDR SNSLIAAGCN SKVSLMYIKP KMVGCELSCN TSKDSYSNSI PFVEAGCSSN VLPYSQDQGC
201: PEEIAEETGC NGIGCCQASL PNEPQQVIGI RTENNDGNST TKVECTVSAF LTDEIYALPK ATKTEHLLAK RYATVSLGWV IQTSNRSFLD SLALACKDRE
301: DYRNTTNLER KCTCGRITIS ETSYANCGCT YGYTGNPYVL NGCKDIDECK VKFEYCGKTE TCVNFEGGYR CVRDKTKAIM IGAGTGFGVL VLVGGLWWLR
401: KFLIKRRITK RKKKFFKRNG GLLLLQELNT REGYVEKTRV FNSRELEKAT ENFSENRVLG HGGQGTVYKG MLVDGRTVAV KKSKVIDEDK LQEFINEVVI
501: LSQINHRHVV KLLGCCLETE VPMLVYEFII NGNLFKHIHE EESDDYTMLW GMRLRIAVDI AGALSYLHSS ASSPIYHRDI KSTNILLDEK YRAKVADFGT
601: SRSVTIDQTH WTTVISGTVG YVDPEYYQSS QYTEKSDVYS FGVILAELIT GDKPVIMVQN TQEIVALAEH FRVAMKEKRL TDIIDARIRN DCKPEQVMAV
701: AKVAMKCLSS KGKKRPNMRE VFTELERICT SPEDSQVHNR IDEEEEEEEE EEEVVTTINR GDSWSISVTA PALSIVASSP SSDVEPLFPR LTW
101: SFGLVRVKFP ITSAGCFNDG KESGGGSKMN FTGSPFFIDR SNSLIAAGCN SKVSLMYIKP KMVGCELSCN TSKDSYSNSI PFVEAGCSSN VLPYSQDQGC
201: PEEIAEETGC NGIGCCQASL PNEPQQVIGI RTENNDGNST TKVECTVSAF LTDEIYALPK ATKTEHLLAK RYATVSLGWV IQTSNRSFLD SLALACKDRE
301: DYRNTTNLER KCTCGRITIS ETSYANCGCT YGYTGNPYVL NGCKDIDECK VKFEYCGKTE TCVNFEGGYR CVRDKTKAIM IGAGTGFGVL VLVGGLWWLR
401: KFLIKRRITK RKKKFFKRNG GLLLLQELNT REGYVEKTRV FNSRELEKAT ENFSENRVLG HGGQGTVYKG MLVDGRTVAV KKSKVIDEDK LQEFINEVVI
501: LSQINHRHVV KLLGCCLETE VPMLVYEFII NGNLFKHIHE EESDDYTMLW GMRLRIAVDI AGALSYLHSS ASSPIYHRDI KSTNILLDEK YRAKVADFGT
601: SRSVTIDQTH WTTVISGTVG YVDPEYYQSS QYTEKSDVYS FGVILAELIT GDKPVIMVQN TQEIVALAEH FRVAMKEKRL TDIIDARIRN DCKPEQVMAV
701: AKVAMKCLSS KGKKRPNMRE VFTELERICT SPEDSQVHNR IDEEEEEEEE EEEVVTTINR GDSWSISVTA PALSIVASSP SSDVEPLFPR LTW
Arabidopsis Description
WAKL18Wall-associated receptor kinase-like 18 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNY5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.