Factsheet for TraesCS1B01G405100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G009770.1	Barley	cytosol	37.95	88.54
HORVU4Hr1G014040.1	Barley	mitochondrion	36.61	87.23
HORVU4Hr1G014050.1	Barley	mitochondrion	36.61	87.23
Solyc06g072540.1.1	Tomato	nucleus	36.16	75.0
GSMUA_AchrUn_...	Banana	cytosol	38.39	61.43
TraesCS4B01G146700.1	Wheat	cytosol	32.14	48.65
TraesCS1B01G353300.1	Wheat	cytosol	47.32	47.32
TraesCS7B01G395800.1	Wheat	cytosol	61.61	32.24
TraesCS3B01G512400.1	Wheat	cytosol	47.77	30.66
TraesCS1B01G412900.1	Wheat	cytosol	31.25	24.31
TraesCS7B01G456800.1	Wheat	cytosol	51.34	22.59
TraesCS2B01G283000.1	Wheat	cytosol	49.11	22.31
TraesCS5B01G388400.1	Wheat	cytosol	47.77	22.06
TraesCS3B01G364300.1	Wheat	cytosol	50.0	22.0
TraesCS4B01G146800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	1.79	1.37
TraesCS1B01G405200.1	Wheat	cytosol	0.0	0.0
TraesCS1B01G353200.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.30.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_asu-like_sf
InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0046034	GO:GO:1902600	InterPro:IPR023366	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874
PANTHER:PTHR42875	SUPFAM:SSF50615	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS1B01G405100	EnsemblPlants:TraesCS1B01G405100.1	:

Description

No Description!

Coordinates

chr1B:+:633718783..633719457

Molecular Weight (calculated)

24025.4 Da

IEP (calculated)

5.776

GRAVY (calculated)

0.170

Length

224 amino acids

Sequence
(BLAST)

001: MATLRVDEIH KILRERIEQY NRKVGIENIG RVVQVGDGIA RIVGLGEIML GELVKFAEGT RGIALNLESK NVGIVLMGDG LMIQEGSFVK ATGRIAQIPV
101: SEAYLGRVVN ALAKPIDGKG EIIASESRLI ESPAPSIISR HSIYGPLQTG LIAIDSMIPI GCGQRELIIG DRQTGKIAVA TDAILNQKGQ GVICVYVAID
201: QRESSVAQVV TTFHEEGAME YCSS

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.