Factsheet for TraesCS5B01G388400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G146700.1	Wheat	cytosol	28.87	94.59
TraesCS2B01G283000.1	Wheat	cytosol	94.43	92.9
BAV58156	Barley	cytosol, plasma membrane	95.67	91.16
TraesCS3B01G512400.1	Wheat	cytosol	65.57	91.12
TraesCS1B01G353300.1	Wheat	cytosol	42.06	91.07
BAC19899	Rice	nucleus, plasma membrane	95.46	90.96
TraesCS5A01G019900.1	Wheat	cytosol, extracellular, golgi, mitochondrion, nucleus, unclear	95.46	90.96
TraesCS7A01G098300.1	Wheat	cytosol	95.26	90.77
TraesCS7B01G456800.1	Wheat	cytosol	95.05	90.57
TraesCS6A01G161000.1	Wheat	cytosol	94.02	89.59
TraesCS4D01G137800.1	Wheat	cytosol	94.02	89.59
TraesCS3B01G364300.1	Wheat	cytosol	92.78	88.41
TraesCS1B01G353200.1	Wheat	mitochondrion	40.0	85.84
VIT_00s0733g00010.t01	Wine grape	extracellular	78.56	84.48
CDY45503	Canola	cytosol	88.04	84.22
CDY45501	Canola	cytosol	88.04	84.22
ATMG01190.1	Thale cress	cytosol	88.04	84.22
TraesCS4B01G146800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	50.31	83.28
AT2G07698.1	Thale cress	endoplasmic reticulum	87.42	54.57
TraesCS1B01G412900.1	Wheat	cytosol	30.72	51.74
TraesCS7B01G395800.1	Wheat	cytosol	42.27	47.9
TraesCS1B01G405100.1	Wheat	cytosol	22.06	47.77
TraesCS1B01G405200.1	Wheat	cytosol	15.46	39.27

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	MapMan:2.4.6.2.1	Gene3D:2.40.30.20	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034
GO:GO:0046933	GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase
PFAM:PF00006	PFAM:PF00306	PFAM:PF02874	PIRSF:PIRSF039088	ScanProsite:PS00152	PANTHER:PTHR43089
SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS5B01G388400	EnsemblPlants:TraesCS5B01G388400.1
TIGR:cd01132	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:567240559..567242117

Molecular Weight (calculated)

52849.7 Da

IEP (calculated)

6.924

GRAVY (calculated)

-0.066

Length

485 amino acids

Sequence
(BLAST)

001: MEFSPRAAEL TTLLESRMTN FYTNFQVDEI GRVVSVGDGI ARVYALNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV NCTGSIVDVP
101: AGKAMLGRVV DALGVPIDGK GALSDHKRRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII EDRQTGKTAI AINTILNQKQ MKNESETLYC
201: VYVAIGQKRS TKAQLVQILS EANALEYSIL VAATASDPAP LQFLAPYSGC AMGEYFRDNG MHALIIYDDL SKQAVAYRQM SLFLRRPPGR EAFLGDVFYL
301: HSRLLERAAK RSDQTGAGSS TALPVIETQA GDVSAYIPTN VISITDGQIC LETELFYRGI RPAINVGLSV SRVGSAAQLK AMKQVCGSSK LELAQYREVA
401: AFAQFGADLD AATQALLNRG ARPTEVPKQP KYEPLPIEKQ IVVIYAAVNG FYDRMPLDRI SQYEKAILST INPELQKSFF FRGTP

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.