Factsheet for TraesCS4B01G146800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G353200.1	Wheat	mitochondrion	74.06	96.02
TraesCS7B01G456800.1	Wheat	cytosol	92.49	53.24
TraesCS3B01G364300.1	Wheat	cytosol	89.08	51.28
TraesCS5B01G388400.1	Wheat	cytosol	83.28	50.31
TraesCS2B01G283000.1	Wheat	cytosol	83.96	49.9
TraesCS1B01G405200.1	Wheat	cytosol	27.99	42.93
TraesCS1B01G412900.1	Wheat	cytosol	34.13	34.72
TraesCS3B01G512400.1	Wheat	cytosol	39.25	32.95
TraesCS7B01G395800.1	Wheat	cytosol	46.76	32.01
Zm00001d016118_P001	Maize	cytosol	11.95	6.4
CDY37772	Canola	cytosol	1.02	6.25
Bra040490.1-P	Field mustard	cytosol	1.02	3.03
TraesCS1B01G405100.1	Wheat	cytosol	1.37	1.79
HORVU4Hr1G059400.2	Barley	cytosol	0.34	0.85
TraesCS7A01G097500.1	Wheat	cytosol	0.68	0.85
TraesCS1B01G353300.1	Wheat	cytosol	0.0	0.0
Solyc07g027010.1.1	Tomato	cytosol	0.0	0.0
TraesCS4B01G146700.1	Wheat	cytosol	0.0	0.0
CDY45669	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_asu_C
InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	InterPro:IPR038376	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306
ScanProsite:PS00152	PANTHER:PTHR43089	SUPFAM:SSF47917	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4B01G146800	EnsemblPlants:TraesCS4B01G146800.1

Description

No Description!

Coordinates

chr4B:+:209242135..209243094

Molecular Weight (calculated)

32456.0 Da

IEP (calculated)

5.920

GRAVY (calculated)

-0.208

Length

293 amino acids

Sequence
(BLAST)

001: MNSRGTNEKV NALEYSILVA AIASDPAPLQ FLDPYSGCAM GEYFRDNGMH ALIIYDDLSK QAVAYRQMSL LLRRPPGREA FPWDVFYLHS RLLERAAKQS
101: DQTDAGSSTA LPVIETQAGD VSAYIPTNVI SITDGQICLE TELFYRRIRP AINVGLSVSR VGSAAQLKAM KQVCGSSKLE LAQYREVAAF AQFESDLDAA
201: TQALLNRGAR LTEVPKQPQY EPLPIEKQIV VIYAAVNGLC DRMPLDRISQ YEKAILSTIN PELQKSFLEK GGLTNKRKME PDASLKESTL PYL

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.