Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040490.1-P | Field mustard | cytosol | 100.0 | 48.48 |
| CDY45669 | Canola | cytosol | 54.17 | 41.94 |
| OQU84776 | Sorghum | cytosol | 52.08 | 32.47 |
| Solyc07g027010.1.1 | Tomato | cytosol | 35.42 | 23.61 |
| HORVU4Hr1G059400.2 | Barley | cytosol | 52.08 | 21.37 |
| TraesCS4D01G279700.1 | Wheat | cytosol | 52.08 | 19.08 |
| TraesCS4B01G146700.1 | Wheat | cytosol | 54.17 | 17.57 |
| TraesCS7A01G097500.1 | Wheat | cytosol | 54.17 | 11.11 |
| TraesCS1D01G196100.1 | Wheat | cytosol | 54.17 | 9.52 |
| CDY45501 | Canola | cytosol | 66.67 | 6.31 |
| CDY45503 | Canola | cytosol | 66.67 | 6.31 |
| TraesCS2D01G089900.1 | Wheat | golgi | 54.17 | 5.52 |
| TraesCS2D01G230100.1 | Wheat | cytosol | 58.33 | 5.5 |
| Zm00001d016118_P001 | Maize | cytosol | 56.25 | 4.94 |
| CDY21186 | Canola | cytosol | 27.08 | 4.18 |
| TraesCS4B01G146800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 6.25 | 1.02 |
| CDY22714 | Canola | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY37772 | EnsemblPlantsGene:GSBRNA2T00064706001 | Gene3D:3.40.50.300 | ProteinID:CDY37772 | ProteinID:CDY37772.1 | UniParc:UPI0004EDEF6D |
| UniProt:A0A078HIT2 | MapMan:35.2 | : | : | : | : |
Description
BnaA10g05490DBnaA10g05490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIT2]
Coordinates
chrLK032407:+:343099..343245
Molecular Weight (calculated)
5340.6 Da
IEP (calculated)
11.722
GRAVY (calculated)
0.142
Length
48 amino acids
Sequence
(BLAST)
(BLAST)
1: MLGRVVDAMG VPIDGRGALS DHEQRRVEVT FVRMARRGSL FLFLVPPS
001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI
Arabidopsis Description
ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.