Factsheet for Bra040490.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37772	Canola	cytosol	48.48	100.0
Solyc07g027010.1.1	Tomato	cytosol	59.6	81.94
HORVU4Hr1G059400.2	Barley	cytosol	71.72	60.68
TraesCS4D01G279700.1	Wheat	cytosol	70.71	53.44
TraesCS4B01G146700.1	Wheat	cytosol	74.75	50.0
OQU84776	Sorghum	cytosol	25.25	32.47
TraesCS7A01G097500.1	Wheat	cytosol	73.74	31.2
TraesCS1D01G196100.1	Wheat	cytosol	73.74	26.74
TraesCS2D01G089900.1	Wheat	golgi	69.7	14.65
TraesCS2D01G230100.1	Wheat	cytosol	74.75	14.54
Zm00001d016118_P001	Maize	cytosol	74.75	13.53
Bra041120.1-P	Field mustard	cytosol	38.38	7.54
TraesCS4B01G146800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	3.03	1.02

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.30.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_asu-like_sf
InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	EnsemblPlantsGene:Bra040490	EnsemblPlants:Bra040490.1	EnsemblPlants:Bra040490.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015992	GO:GO:0046034	GO:GO:1902600
InterPro:IPR023366	UniProt:M4FHB2	PFAM:PF02874	PANTHER:PTHR43089	SUPFAM:SSF50615	UniParc:UPI000253ED1F

Description

AT2G07698 (E=1e-039) | ATP synthase alpha chain, mitochondrial, putative

Coordinates

chrScaffold000212:-:904..1203

Molecular Weight (calculated)

10539.0 Da

IEP (calculated)

9.366

GRAVY (calculated)

0.257

Length

99 amino acids

Sequence
(BLAST)

1: MVLFANGVKG MALNLENENV GIVVFGGDTA IKEGDLVKRT GSIVDVPAGK AMLGRVVDAM GVPIDGRGAL SDHEQRRVEV TFVRMARRGS LFLFLVPPS

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.