Factsheet for TraesCS2D01G089900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G196100.1	Wheat	cytosol	55.41	95.6
TraesCS4D01G279700.1	Wheat	cytosol	26.54	95.42
TraesCS3B01G512400.1	Wheat	cytosol	68.15	91.98
TraesCS7A01G097500.1	Wheat	cytosol	45.22	91.03
TraesCS2D01G230100.1	Wheat	cytosol	93.63	86.64
TraesCS4D01G137800.1	Wheat	cytosol	92.78	85.85
OQU84776	Sorghum	cytosol	14.01	85.71
TraesCS3D01G226800.1	Wheat	cytosol	90.87	85.6
TraesCS1D01G193600.1	Wheat	cytosol	93.63	83.52
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	60.72	82.18
Solyc07g027010.1.1	Tomato	cytosol	12.53	81.94
HORVU7Hr1G072410.1	Barley	cytosol	22.29	78.36
TraesCS5D01G079600.1	Wheat	cytosol	42.25	76.25
TraesCS6D01G226200.1	Wheat	mitochondrion	35.03	75.69
TraesCS5D01G079500.1	Wheat	golgi	35.03	75.34
Bra040490.1-P	Field mustard	cytosol	14.65	69.7
CDY37772	Canola	cytosol	5.52	54.17
TraesCS5D01G459400.1	Wheat	cytosol	47.77	53.32
CDY45669	Canola	cytosol	7.01	53.23
TraesCS5D01G011000.1	Wheat	cytosol	43.74	53.09
TraesCS1D01G193400.1	Wheat	cytosol	32.48	52.76
TraesCS1D01G070400.1	Wheat	cytosol	43.74	51.24
TraesCS5D01G458900.1	Wheat	plastid	50.32	47.02
TraesCS1D01G181000.1	Wheat	cytosol	49.26	46.03
Zm00001d016118_P001	Maize	cytosol	45.65	39.31
TraesCS4D01G042900.1	Wheat	cytosol	15.5	38.22
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	8.92	18.26

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	MapMan:2.4.6.2.1	Gene3D:2.40.30.20	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF00306	PFAM:PF02874	PIRSF:PIRSF039088	PANTHER:PTHR43089	SUPFAM:SSF47917	SUPFAM:SSF50615
SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS2D01G089900	EnsemblPlants:TraesCS2D01G089900.1	TIGR:cd01132	:

Description

No Description!

Coordinates

chr2D:+:39655661..39657076

Molecular Weight (calculated)

52055.7 Da

IEP (calculated)

8.666

GRAVY (calculated)

-0.165

Length

471 amino acids

Sequence
(BLAST)

001: MEFSPRAAEL TTLLESRMTN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTRSIVDVR
101: ARKDMLGRVV NALGVPIDGK GALSNHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTTI AIDTILNQKQ MNSRVTNESD
201: TLYCVYVAIG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSWCAMGEYF RDNGMHALII YDDLSKQEVA YRQMSLLLRR PPGREAFPRD
301: VFYLHSRLLE RAAKQSDQTG VGSSTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRRIRRAINV GLSVSRVGSA AHLKAMKQVR GTSKLELSQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFRDRMP LDRISQYEKP F

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.