Factsheet for TraesCS2D01G492000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g045710.1.1	Tomato	nucleus	8.7	58.82
TraesCS4D01G042900.1	Wheat	cytosol	15.22	18.32
TraesCS1D01G193400.1	Wheat	cytosol	18.26	14.48
TraesCS5D01G079500.1	Wheat	golgi	12.61	13.24
PGSC0003DMT400057252	Potato	extracellular	14.35	12.41
TraesCS6D01G226200.1	Wheat	mitochondrion	11.3	11.93
TraesCS5D01G011000.1	Wheat	cytosol	20.0	11.86
TraesCS1D01G070400.1	Wheat	cytosol	20.0	11.44
TraesCS5D01G459400.1	Wheat	cytosol	20.43	11.14
TraesCS5D01G458900.1	Wheat	plastid	23.04	10.52
TraesCS1D01G181000.1	Wheat	cytosol	22.17	10.12
PGSC0003DMT400035968	Potato	cytosol, mitochondrion, nucleus	3.48	9.41
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	13.91	9.2
TraesCS2D01G089900.1	Wheat	golgi	18.26	8.92
TraesCS3D01G226800.1	Wheat	cytosol	18.7	8.6
TraesCS2D01G230100.1	Wheat	cytosol	18.7	8.45
TraesCS1D01G193600.1	Wheat	cytosol	19.13	8.33
TraesCS4D01G137800.1	Wheat	cytosol	18.26	8.25
TraesCS4D01G279700.1	Wheat	cytosol	4.35	7.63
TraesCS1D01G196100.1	Wheat	cytosol	6.09	5.13
TraesCS5D01G079600.1	Wheat	cytosol	4.78	4.21

Protein Annotations

EnsemblPlants:TraesCS2D01G492000.1	EnsemblPlantsGene:TraesCS2D01G492000	Gene3D:3.40.50.12240	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_a/bsu_AS	InterPro:P-loop_NTPase	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	PANTHER:PTHR43089
PANTHER:PTHR43089:SF2	ScanProsite:PS00152	SEG:seg	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr2D:+:590084733..590085425

Molecular Weight (calculated)

24832.3 Da

IEP (calculated)

10.493

GRAVY (calculated)

-0.170

Length

230 amino acids

Sequence
(BLAST)

001: MSALGLVERP LLGYEVMVLC RHCLLACTRR IFGPLLADAA RGGRGCTADP PAPAITPTTT ARRLLLRHGV VEVCIHQLHA WSSRHGPVGA PKPSHRRSPS
101: PLSGQSLETS GELVRMPPSI TYGQICLETE LFYRGIRPAI NIGLSVSRIG SAAQLKAMKQ VCGRKRSRSP FSCACRYMHS ETNELPLVVA PFVPDLVQSH
201: GGAANWPQGR PPCASTPSRG SPTTHYRSRA

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.