Factsheet for TraesCS1D01G193600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G196100.1	Wheat	cytosol	50.38	97.44
BAC19899	Rice	nucleus, plasma membrane	92.99	96.46
TraesCS4D01G137800.1	Wheat	cytosol	92.8	96.27
TraesCS4D01G279700.1	Wheat	cytosol	23.86	96.18
TraesCS2D01G230100.1	Wheat	cytosol	92.42	95.87
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	63.07	95.69
TraesCS3B01G364300.1	Wheat	cytosol	91.48	94.89
HORVU0Hr1G019950.1	Barley	mitochondrion	94.32	94.86
TraesCS2D01G089900.1	Wheat	golgi	83.52	93.63
TraesCS3D01G226800.1	Wheat	cytosol	88.45	93.4
TraesCS5D01G079500.1	Wheat	golgi	38.64	93.15
VIT_00s0733g00010.t01	Wine grape	extracellular	77.65	90.91
TraesCS6D01G226200.1	Wheat	mitochondrion	37.31	90.37
ATMG01190.1	Thale cress	cytosol	85.98	89.55
CDY45503	Canola	cytosol	85.98	89.55
CDY45501	Canola	cytosol	85.98	89.55
TraesCS5D01G079600.1	Wheat	cytosol	38.07	77.01
AT2G07698.1	Thale cress	endoplasmic reticulum	85.42	58.04
TraesCS5D01G459400.1	Wheat	cytosol	44.32	55.45
TraesCS5D01G011000.1	Wheat	cytosol	40.72	55.41
TraesCS1D01G193400.1	Wheat	cytosol	29.73	54.14
TraesCS1D01G070400.1	Wheat	cytosol	40.34	52.99
TraesCS5D01G458900.1	Wheat	plastid	47.35	49.6
TraesCS1D01G181000.1	Wheat	cytosol	46.21	48.41
TraesCS4D01G042900.1	Wheat	cytosol	15.53	42.93
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	8.33	19.13

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	MapMan:2.4.6.2.1	Gene3D:2.40.30.20	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034
GO:GO:0046933	GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase
PFAM:PF00006	PFAM:PF00306	PFAM:PF02874	PIRSF:PIRSF039088	ScanProsite:PS00152	PANTHER:PTHR43089
SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS1D01G193600	EnsemblPlants:TraesCS1D01G193600.1
TIGR:cd01132	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:269426155..269427741

Molecular Weight (calculated)

57510.4 Da

IEP (calculated)

6.120

GRAVY (calculated)

-0.098

Length

528 amino acids

Sequence
(BLAST)

001: MEFSPRVAEL ATLLESRMTN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKFVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE
201: TLYCVYVAIG QKHSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHTLII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSSTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV VLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAVTQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFCDRMP LDRISQYEKA ILSTINPELQ KSFLEKGGLT NERKMEPDAS
501: LKESTLNKKG CPLLADVGRR LFLPTEPQ

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.