Factsheet for TraesCS4D01G042900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G395800.1	Wheat	cytosol	94.76	42.29
HORVU4Hr1G045340.3	Barley	cytosol	95.81	36.31
AGP50752	Barley	cytosol	95.81	36.31
TraesCS5D01G458900.1	Wheat	plastid	95.29	36.11
HORVU6Hr1G049170.4	Barley	plastid	95.81	36.09
Bra041120.1-P	Field mustard	cytosol	94.76	35.91
KRH04726	Soybean	cytosol	27.23	35.86
CAA33993	Rice	plasma membrane, plastid	93.72	35.31
TraesCS1D01G181000.1	Wheat	cytosol	92.67	35.12
TraesCS6D01G226200.1	Wheat	mitochondrion	38.74	33.95
TraesCS5D01G079500.1	Wheat	golgi	38.74	33.79
TraesCS1D01G193400.1	Wheat	cytosol	37.17	24.48
TraesCSU01G174100.1	Wheat	cytosol	53.93	24.29
TraesCS5D01G459400.1	Wheat	cytosol	53.4	24.17
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	38.74	21.26
TraesCS5D01G011000.1	Wheat	cytosol	36.13	17.78
TraesCS4D01G137800.1	Wheat	cytosol	42.93	16.11
TraesCS3D01G226800.1	Wheat	cytosol	41.36	15.8
TraesCS2D01G230100.1	Wheat	cytosol	41.88	15.72
TraesCS1D01G070400.1	Wheat	cytosol	32.98	15.67
TraesCS1D01G193600.1	Wheat	cytosol	42.93	15.53
TraesCS2D01G089900.1	Wheat	golgi	38.22	15.5
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	18.32	15.22
Solyc03g033440.1.1	Tomato	nucleus, plastid	1.05	1.83
TraesCS5D01G079600.1	Wheat	cytosol	0.52	0.38
TraesCS4D01G279700.1	Wheat	cytosol	0.0	0.0
TraesCS1D01G196100.1	Wheat	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_asu_C
InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	InterPro:IPR038376	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306
ScanProsite:PS00152	PANTHER:PTHR42875	SUPFAM:SSF47917	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4D01G042900	EnsemblPlants:TraesCS4D01G042900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:19903472..19904047

Molecular Weight (calculated)

21301.6 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.176

Length

191 amino acids

Sequence
(BLAST)

001: MTALPIVETQ SSDVSAYIPT NVISITYGQI FLYVDLFNAG IRPAINVGIS VSGVGSAAQI KAMKQVAGKS KLELAQFAEL QAFAQFASAL DKTSQNQLAR
101: GRRLRELLKQ SQANPLPVEE QIATIYTGTR GYLDSLEIEQ VNKFLDELRK HLKDTKPQFQ EIISTSKTFT EQAEIFLKET IQEQLERFSL Q

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.