CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G207900.1	Wheat	mitochondrion	46.21	29.65
TraesCS4D01G042900.1	Wheat	cytosol	35.86	27.23
KRH57912	Soybean	nucleus	42.76	22.55
TraesCSU01G234000.1	Wheat	cytosol	38.62	19.58
TraesCS7B01G395800.1	Wheat	cytosol	41.38	14.02
TraesCSU01G174100.1	Wheat	cytosol	37.93	12.97
TraesCS5D01G459400.1	Wheat	cytosol	37.24	12.8
KRH27381	Soybean	cytosol, endoplasmic reticulum, plasma membrane	43.45	12.35
AGP50752	Barley	cytosol	41.38	11.9
HORVU4Hr1G045340.3	Barley	cytosol	41.38	11.9
TraesCS5D01G458900.1	Wheat	plastid	41.38	11.9
CAA33993	Rice	plasma membrane, plastid	41.38	11.83
HORVU6Hr1G049170.4	Barley	plastid	41.38	11.83
Bra041120.1-P	Field mustard	cytosol	40.69	11.71
TraesCS1D01G181000.1	Wheat	cytosol	40.0	11.51
KRH07855	Soybean	cytosol	29.66	10.64
TraesCS5D01G011000.1	Wheat	cytosol	28.28	10.57
TraesCS1D01G070400.1	Wheat	cytosol	28.97	10.45
Solyc03g033440.1.1	Tomato	nucleus, plastid	4.14	5.5
KRH39007	Soybean	cytosol	2.07	2.54

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02010513
InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	EnsemblPlantsGene:GLYMA_17G182100	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	InterPro:IPR038376	UniProt:K7MMC6	EnsemblPlants:KRH04726
ProteinID:KRH04726	ProteinID:KRH04726.1	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306	PANTHER:PTHR43089
MetaCyc:PWY-7219	SUPFAM:SSF47917	SUPFAM:SSF52540	UniParc:UPI000296499B	:	:

Description

hypothetical protein

Coordinates

chr17:+:22134814..22136771

Molecular Weight (calculated)

16060.4 Da

IEP (calculated)

9.828

GRAVY (calculated)

-0.246

Length

145 amino acids

Sequence
(BLAST)

001: MGKVRIETTS NYPPIGTRAE RHCPDRGRSK RPLDKRKGFR LSFIETQARD ILAYIPTDVI SITAGQICLK TEFFYRGIRL AINDGLSVSR VGSATQLKAT
101: EQVCVVAFAQ FDSDLDAATQ ALLNSGARLT EVLKQPQYAS LPIEK

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.