Factsheet for TraesCS1D01G181000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AGP50752	Barley	cytosol	97.02	97.02
HORVU4Hr1G045340.3	Barley	cytosol	96.83	96.83
Bra041120.1-P	Field mustard	cytosol	96.63	96.63
TraesCS7B01G395800.1	Wheat	cytosol	81.94	96.5
HORVU6Hr1G049170.4	Barley	plastid	97.02	96.45
TraesCS5D01G458900.1	Wheat	plastid	96.23	96.23
TraesCS5D01G459400.1	Wheat	cytosol	80.36	95.97
TraesCS5D01G011000.1	Wheat	cytosol	73.41	95.36
TraesCSU01G174100.1	Wheat	cytosol	79.76	94.81
CAA33993	Rice	plasma membrane, plastid	95.24	94.67
TraesCS4D01G042900.1	Wheat	cytosol	35.12	92.67
TraesCS1D01G070400.1	Wheat	cytosol	71.43	89.55
TraesCS1D01G193400.1	Wheat	cytosol	47.62	82.76
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	34.13	49.43
TraesCS2D01G089900.1	Wheat	golgi	46.03	49.26
TraesCS1D01G196100.1	Wheat	cytosol	26.59	49.08
TraesCS4D01G137800.1	Wheat	cytosol	47.82	47.35
TraesCS4D01G279700.1	Wheat	cytosol	12.3	47.33
TraesCS2D01G230100.1	Wheat	cytosol	47.02	46.56
TraesCS1D01G193600.1	Wheat	cytosol	48.41	46.21
TraesCS3D01G226800.1	Wheat	cytosol	45.44	45.8
TraesCS5D01G079500.1	Wheat	golgi	19.05	43.84
TraesCS6D01G226200.1	Wheat	mitochondrion	18.85	43.58
KRH04726	Soybean	cytosol	11.51	40.0
TraesCS5D01G079600.1	Wheat	cytosol	19.05	36.78
Solyc03g033440.1.1	Tomato	nucleus, plastid	6.15	28.44
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	10.12	22.17

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:1.1.9.2.1	Gene3D:1.20.150.20	Gene3D:2.40.30.20	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF00306	PFAM:PF02874	PANTHER:PTHR42875	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540
TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS1D01G181000	EnsemblPlants:TraesCS1D01G181000.1	TIGR:cd01132	SEG:seg	:

Description

No Description!

Coordinates

chr1D:+:254461215..254462729

Molecular Weight (calculated)

55365.2 Da

IEP (calculated)

8.532

GRAVY (calculated)

-0.056

Length

504 amino acids

Sequence
(BLAST)

001: MATLRVDEIH KILREHIEQY NRKVGIENIG RVVQVGDGIA RIIGLGEIMS GELIKFAEGT RGIALNLESK NVGIVLMGDG LMIQEGSFVK ATGRIAQIPV
101: SEAYLGRVVN ALAKPIDGKG KIIASQSRLI ESPAPSIISR CSVYEPLPTG LIAIDSMIPI GRGQRELIIG DRQTGKIAVA TDTILNQKGQ GVICVYVAIG
201: QRASSVAQVV TTFHEEGAME YTIVVAEMAD SPATLQYLAP YTGAALAEYF MYRERHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPRD VFYLHSRLLE
301: RAAKLNSLLG EGSMTTLPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRSAINV GISVSRVGSA AQIKPMKQVA SKSKLELAQF AELQAFAQFA
401: SALDKTSQNQ LARGQRLREL LKQSQANPLP VEEQIATIYT GTRGYLDSLE IEQVNKFLDE LRKHLKDTKP QFQEIISSSK TFTKQAEILL KEAIQEQLER
501: FSLQ

Best Arabidopsis Sequence Match ( ATCG00120.1 )
(BLAST)

001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV

Arabidopsis Description

ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.