Factsheet for TraesCS6D01G226200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G207900.1	Wheat	mitochondrion	90.83	87.61
TraesCSU01G248800.1	Wheat	mitochondrion	90.37	87.17
TraesCS1B01G353200.1	Wheat	mitochondrion	90.37	87.17
TraesCS5D01G079500.1	Wheat	golgi	85.78	85.39
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	82.11	51.44
TraesCS4D01G042900.1	Wheat	cytosol	33.95	38.74
TraesCS4D01G137800.1	Wheat	cytosol	89.91	38.51
TraesCS2D01G230100.1	Wheat	cytosol	89.45	38.31
TraesCS3D01G226800.1	Wheat	cytosol	87.61	38.2
TraesCS1D01G193600.1	Wheat	cytosol	90.37	37.31
TraesCS2D01G089900.1	Wheat	golgi	75.69	35.03
TraesCS1D01G193400.1	Wheat	cytosol	33.03	24.83
TraesCS5D01G459400.1	Wheat	cytosol	38.99	20.14
TraesCS5D01G458900.1	Wheat	plastid	45.87	19.84
TraesCS1D01G181000.1	Wheat	cytosol	43.58	18.85
TraesCS5D01G011000.1	Wheat	cytosol	32.11	18.04
TraesCS1D01G070400.1	Wheat	cytosol	30.28	16.42
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	11.93	11.3
TraesCS5D01G079600.1	Wheat	cytosol	3.21	2.68
TraesCS1D01G196100.1	Wheat	cytosol	0.0	0.0
TraesCS4D01G279700.1	Wheat	cytosol	0.0	0.0
TraesCS1B01G353300.1	Wheat	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_asu_C
InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	InterPro:IPR038376	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306
ScanProsite:PS00152	PANTHER:PTHR43089	SUPFAM:SSF47917	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS6D01G226200	EnsemblPlants:TraesCS6D01G226200.1

Description

No Description!

Coordinates

chr6D:-:317972523..317973179

Molecular Weight (calculated)

24202.2 Da

IEP (calculated)

8.602

GRAVY (calculated)

-0.103

Length

218 amino acids

Sequence
(BLAST)

001: MSLLLRRPPG REAFQGDVFY LHSRLFERAA KRSDQTGAGS STALPVIETQ AGDVSAYIPA NVISITDGQI CLETELFYRG IRPAINIGLS ISRVWSAAQL
101: KAMKQVCGSS KLELAQYREV AAFTQFGSDL DAATQAILSR GPRLTEVPKQ PQYEPLPIEK QIVVIYAAVN SFCDRMPLDR ISQYEKAILS TNPELQKSFL
201: EKGGLTNERK VVCMFFHI

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.