Factsheet for TraesCS1D01G193400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G147900.1	Wheat	cytosol	95.86	96.53
TraesCS1B01G412900.1	Wheat	cytosol	95.52	96.18
TraesCS3A01G383800.1	Wheat	cytosol	95.17	95.83
TraesCS1A01G113000.1	Wheat	cytosol	91.38	91.38
TraesCS5D01G011000.1	Wheat	cytosol	82.76	61.86
TraesCS5D01G459400.1	Wheat	cytosol	84.14	57.82
TraesCS1D01G070400.1	Wheat	cytosol	79.31	57.21
PGSC0003DMT400035968	Potato	cytosol, mitochondrion, nucleus	16.21	55.29
TraesCS5D01G458900.1	Wheat	plastid	83.79	48.21
TraesCS1D01G181000.1	Wheat	cytosol	82.76	47.62
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	48.62	40.52
TraesCS4D01G042900.1	Wheat	cytosol	24.48	37.17
Solyc08g045710.1.1	Tomato	nucleus	4.14	35.29
TraesCS6D01G226200.1	Wheat	mitochondrion	24.83	33.03
TraesCS5D01G079500.1	Wheat	golgi	24.83	32.88
TraesCS2D01G089900.1	Wheat	golgi	52.76	32.48
PGSC0003DMT400057252	Potato	extracellular	28.28	30.83
TraesCS4D01G137800.1	Wheat	cytosol	53.45	30.45
TraesCS2D01G230100.1	Wheat	cytosol	52.41	29.86
TraesCS1D01G193600.1	Wheat	cytosol	54.14	29.73
TraesCS3D01G226800.1	Wheat	cytosol	51.03	29.6
TraesCS1D01G196100.1	Wheat	cytosol	26.21	27.84
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	14.48	18.26
TraesCS5D01G079600.1	Wheat	cytosol	13.45	14.94
TraesCS4D01G279700.1	Wheat	cytosol	3.1	6.87

Protein Annotations

EnsemblPlants:TraesCS1D01G193400.1	EnsemblPlantsGene:TraesCS1D01G193400	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	InterPro:P-loop_NTPase	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14
PANTHER:PTHR42875	PFAM:PF00006	ScanProsite:PS00152	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:+:269415823..269417785

Molecular Weight (calculated)

31935.7 Da

IEP (calculated)

7.559

GRAVY (calculated)

0.050

Length

290 amino acids

Sequence
(BLAST)

001: MKMASSGCKL EDLGRMEESL TIFSLNYSNF LFEKAEIAQF ERRLSFIGLI AIDSMIPIGR GQREFIIGDR QTGKTAVATD TILNQKGQGV ICVYVAIGQR
101: ASSVAQVVTT FHEEGAMEYT IVVAEMADSP ATLQYLAPYT GAALAEYFMY RERHTLIIYD DLSKRAQAYR QMSLLLRRPP GREAYPGDVF YLHSRLLERA
201: AKLNSLLGEG SMTALPIVET QSGDVSAYIP TNVISITDGQ IFLSADLFHA RIRPAINVGI SVSRVGSAAQ IKAMKQVAGK SKLELAQFVE

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.