Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G147900.1 | Wheat | cytosol | 92.07 | 92.71 |
| TraesCS1B01G412900.1 | Wheat | cytosol | 91.72 | 92.36 |
| TraesCS3A01G383800.1 | Wheat | cytosol | 91.38 | 92.01 |
| TraesCS1D01G193400.1 | Wheat | cytosol | 91.38 | 91.38 |
| PGSC0003DMT400035968 | Potato | cytosol, mitochondrion, nucleus | 15.52 | 52.94 |
| TraesCS5A01G207900.1 | Wheat | mitochondrion | 25.52 | 32.74 |
| Solyc08g045710.1.1 | Tomato | nucleus | 3.79 | 32.35 |
| PGSC0003DMT400057252 | Potato | extracellular | 26.9 | 29.32 |
| TraesCS5A01G019900.1 | Wheat | cytosol, extracellular, golgi, mitochondrion, nucleus, unclear | 51.03 | 29.08 |
| TraesCS7A01G098300.1 | Wheat | cytosol | 51.03 | 29.08 |
| TraesCS2A01G547200.1 | Wheat | golgi | 50.34 | 28.68 |
| TraesCS6A01G161000.1 | Wheat | cytosol | 50.34 | 28.68 |
| TraesCS7A01G097500.1 | Wheat | cytosol | 17.93 | 22.22 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G113000.1 | EnsemblPlantsGene:TraesCS1A01G113000 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd | InterPro:ATPase_a/bsu_AS | InterPro:P-loop_NTPase | KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 |
| PANTHER:PTHR42875 | PFAM:PF00006 | ScanProsite:PS00152 | SUPFAM:SSF52540 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1A:-:115920754..115932249
Molecular Weight (calculated)
31947.5 Da
IEP (calculated)
5.910
GRAVY (calculated)
0.022
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKASSGCKL EELGRMEESL TVFSLNYSNF LFEKAEIAQF ERGLSFIGLI AIDSMIPIGR GQREFIIGDR QTGKIAVATD TILNQKGQGV ICVYVAIGQR
101: ASFVAQVVTT FHEEGAMVYT IVVAEMADSP AALQYLTPYT GAALAEYFMY RERYTLIIYD DLSKQAQAYR QMSLLLRRPP DREAYPGDVF YLHSRLLERA
201: AKLSSLLGEG SMTALPIVET QSRDVSAYIP TNNFSENDGQ IFLSADLFNV GIRPAINAGI SVSRVGSATQ IKAMKQVAGK SKLEVAQFAE
101: ASFVAQVVTT FHEEGAMVYT IVVAEMADSP AALQYLTPYT GAALAEYFMY RERYTLIIYD DLSKQAQAYR QMSLLLRRPP DREAYPGDVF YLHSRLLERA
201: AKLSSLLGEG SMTALPIVET QSRDVSAYIP TNNFSENDGQ IFLSADLFNV GIRPAINAGI SVSRVGSATQ IKAMKQVAGK SKLEVAQFAE
001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI
Arabidopsis Description
ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.