Factsheet for TraesCS2A01G547200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G207900.1	Wheat	mitochondrion	43.81	98.67
TraesCS5A01G019900.1	Wheat	cytosol, extracellular, golgi, mitochondrion, nucleus, unclear	98.23	98.23
TraesCS7A01G098300.1	Wheat	cytosol	97.84	97.84
TraesCS6A01G161000.1	Wheat	cytosol	97.05	97.05
BAC19899	Rice	nucleus, plasma membrane	96.46	96.46
HORVU0Hr1G019950.1	Barley	mitochondrion	98.82	95.81
TraesCS2B01G283000.1	Wheat	cytosol	92.14	95.13
TraesCS7A01G097500.1	Wheat	cytosol	42.63	92.73
VIT_00s0733g00010.t01	Wine grape	extracellular	81.53	92.02
ATMG01190.1	Thale cress	cytosol	89.19	89.55
CDY45501	Canola	cytosol	89.19	89.55
CDY45503	Canola	cytosol	89.19	89.55
AT2G07698.1	Thale cress	endoplasmic reticulum	88.61	58.04
TraesCS3A01G383800.1	Wheat	cytosol	29.08	51.39
TraesCS1A01G113000.1	Wheat	cytosol	28.68	50.34

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	MapMan:2.4.6.2.1	Gene3D:2.40.30.20	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF00306	PFAM:PF02874	PIRSF:PIRSF039088	PANTHER:PTHR43089	SUPFAM:SSF47917	SUPFAM:SSF50615
SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS2A01G547200	EnsemblPlants:TraesCS2A01G547200.1	TIGR:cd01132	:

Description

No Description!

Coordinates

chr2A:+:755479557..755481086

Molecular Weight (calculated)

55455.8 Da

IEP (calculated)

5.629

GRAVY (calculated)

-0.097

Length

509 amino acids

Sequence
(BLAST)

001: MEFSPRAAEL TTLLESRMTN FYTNFQVDEI GRVVLVGDGI ARVYGLNEIQ AGEMVEFASS VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DALGVPIDGK GALSDHERGR VEVKAPGIIE RKFVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE
201: TLYCVYVAIG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSSTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRRIRPTINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFCDRMP LDRISQYEKA ILSTINPELQ KSFLEKGGLT NERKMEPDAS
501: LKESTLPYL

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.