Factsheet for TraesCS6A01G161000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
BAV58156	Barley	cytosol, plasma membrane	98.23	98.23
TraesCS5A01G207900.1	Wheat	mitochondrion	43.42	97.79
TraesCS5A01G019900.1	Wheat	cytosol, extracellular, golgi, mitochondrion, nucleus, unclear	97.64	97.64
TraesCS7A01G098300.1	Wheat	cytosol	97.25	97.25
TraesCS2A01G547200.1	Wheat	golgi	97.05	97.05
BAC19899	Rice	nucleus, plasma membrane	95.87	95.87
TraesCS5B01G388400.1	Wheat	cytosol	89.59	94.02
TraesCS7A01G097500.1	Wheat	cytosol	42.44	92.31
VIT_00s0733g00010.t01	Wine grape	extracellular	80.94	91.35
ATMG01190.1	Thale cress	cytosol	89.0	89.35
CDY45501	Canola	cytosol	89.0	89.35
CDY45503	Canola	cytosol	89.0	89.35
AT2G07698.1	Thale cress	endoplasmic reticulum	88.41	57.92
TraesCS3A01G383800.1	Wheat	cytosol	29.27	51.74
TraesCS1A01G113000.1	Wheat	cytosol	28.68	50.34

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	MapMan:2.4.6.2.1	Gene3D:2.40.30.20	Gene3D:3.40.50.300
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF00306	PFAM:PF02874	PIRSF:PIRSF039088	PANTHER:PTHR43089	SUPFAM:SSF47917	SUPFAM:SSF50615
SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS6A01G161000	EnsemblPlants:TraesCS6A01G161000.1	TIGR:cd01132	:

Description

No Description!

Coordinates

chr6A:+:155856307..155857836

Molecular Weight (calculated)

55385.8 Da

IEP (calculated)

6.544

GRAVY (calculated)

-0.092

Length

509 amino acids

Sequence
(BLAST)

001: MEFSPRAAEL TTLLESRMAN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGERVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVGVP
101: AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPRIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE
201: ALYCVYVAIG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRPDQTG AGSSTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRLAINV GLSVSRVGSV AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFCDRMP LDRISQYEKA ILSTINPELQ KSFLEKGGLT NERKMEPDAC
501: LKESTLPYL

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.