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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45503 Canola cytosol 100.0 100.0
ATMG01190.1 Thale cress cytosol 99.61 99.61
BAC19899 Rice nucleus, plasma membrane 90.73 90.37
BAV58156 Barley cytosol, plasma membrane 90.73 90.37
TraesCS5A01G019900.1 Wheat cytosol, extracellular, golgi, mitochondrion, nucleus, unclear 90.73 90.37
TraesCS7A01G098300.1 Wheat cytosol 90.14 89.78
TraesCS7B01G456800.1 Wheat cytosol 89.74 89.39
TraesCS2A01G547200.1 Wheat golgi 89.55 89.19
TraesCS6A01G161000.1 Wheat cytosol 89.35 89.0
VIT_00s0733g00010.t01 Wine grape extracellular 78.9 88.69
TraesCS4D01G137800.1 Wheat cytosol 88.76 88.41
TraesCS5B01G388400.1 Wheat cytosol 84.22 88.04
TraesCS2B01G283000.1 Wheat cytosol 85.6 88.03
TraesCS1D01G137400.1 Wheat cytosol, mitochondrion, plastid 60.35 87.93
TraesCS3B01G364300.1 Wheat cytosol 88.17 87.82
HORVU1Hr1G051340.1 Barley cytosol 11.24 87.69
HORVU0Hr1G019950.1 Barley mitochondrion 90.73 87.62
TraesCS3D01G226800.1 Wheat cytosol 85.6 86.8
TraesCS1D01G193600.1 Wheat cytosol 89.55 85.98
GSMUA_AchrUn_... Banana plasma membrane 77.91 77.15
CDY37772 Canola cytosol 6.31 66.67
AT2G07698.1 Thale cress endoplasmic reticulum 98.82 64.48
CDY45669 Canola cytosol 7.69 62.9
CDY21186 Canola cytosol 32.35 52.73
CDY22714 Canola mitochondrion, plastid 7.69 21.08
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:1.20.150.20MapMan:2.4.6.2.1Gene3D:2.40.30.20Gene3D:3.40.50.300
ProteinID:AIZ06207.1ProteinID:AIZ06282.1ProteinID:AKD00216.1InterPro:ATP_synth_F1_aInterPro:ATP_synth_F1_asuInterPro:ATP_synth_asu-like_sf
InterPro:ATP_synth_asu_CInterPro:ATP_synth_asu_C_sfInterPro:ATPase_F1/V1/A1_a/bsu_NInterPro:ATPase_F1/V1/A1_a/bsu_N_sfInterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:ATPase_a/bsu_AS
ProteinID:CBX48379.1EnsemblPlants:CDY45501ProteinID:CDY45501ProteinID:CDY45501.1ProteinID:CDY45503.1GO:F8K8U8
UniProt:F8K8U8GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005743GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015986GO:GO:0015992GO:GO:0016020
GO:GO:0016787GO:GO:0032559GO:GO:0045261GO:GO:0046034GO:GO:0046933GO:GO:0099132
GO:GO:1902600EnsemblPlantsGene:GSBRNA2T00082162001InterPro:IPR023366InterPro:IPR038376HAMAP:MF_01346InterPro:P-loop_NTPase
PFAM:PF00006PFAM:PF00306PFAM:PF02874PIRSF:PIRSF039088ScanProsite:PS00152PANTHER:PTHR43089
PANTHER:PTHR43089:SF2MetaCyc:PWY-7219SUPFAM:SSF47917SUPFAM:SSF50615SUPFAM:SSF52540TIGRFAMs:TIGR00962
UniParc:UPI00001262C2:::::
Description
BnaCnng12600DATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:F8K8U8]
Coordinates
chrLK032627:+:62524..64047
Molecular Weight (calculated)
55060.5 Da
IEP (calculated)
6.208
GRAVY (calculated)
-0.077
Length
507 amino acids
Sequence
(BLAST)
001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGR GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI
Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)
001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI
Arabidopsis Description
ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.