Factsheet for TraesCS1D01G137400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G079500.1	Wheat	golgi	54.6	86.76
TraesCS6D01G226200.1	Wheat	mitochondrion	51.44	82.11
TraesCS4D01G137800.1	Wheat	cytosol	96.55	66.01
TraesCS7B01G456800.1	Wheat	cytosol	96.26	65.82
TraesCS2D01G230100.1	Wheat	cytosol	94.83	64.83
BAC19899	Rice	nucleus, plasma membrane	93.97	64.24
TraesCS1D01G193600.1	Wheat	cytosol	95.69	63.07
TraesCS3D01G226800.1	Wheat	cytosol	89.08	62.0
TraesCS2D01G089900.1	Wheat	golgi	82.18	60.72
CDY45501	Canola	cytosol	87.93	60.35
CDY45503	Canola	cytosol	87.93	60.35
ATMG01190.1	Thale cress	cytosol	87.64	60.16
VIT_00s0733g00010.t01	Wine grape	extracellular	73.85	56.98
GSMUA_AchrUn_...	Banana	plasma membrane	72.7	49.41
TraesCS1D01G193400.1	Wheat	cytosol	40.52	48.62
TraesCS1D01G196100.1	Wheat	cytosol	34.77	44.32
AT2G07698.1	Thale cress	endoplasmic reticulum	87.93	39.38
TraesCS4D01G042900.1	Wheat	cytosol	21.26	38.74
TraesCS5D01G459400.1	Wheat	cytosol	45.4	37.44
TraesCS5D01G011000.1	Wheat	cytosol	41.38	37.11
TraesCS1D01G070400.1	Wheat	cytosol	40.8	35.32
TraesCS5D01G458900.1	Wheat	plastid	50.29	34.72
TraesCS1D01G181000.1	Wheat	cytosol	49.43	34.13
TraesCS5D01G079600.1	Wheat	cytosol	17.24	22.99
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	9.2	13.91
TraesCS4D01G279700.1	Wheat	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_F1_asu
InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933
InterPro:IPR038376	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306	ScanProsite:PS00152	PANTHER:PTHR43089
SUPFAM:SSF47917	SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS1D01G137400	EnsemblPlants:TraesCS1D01G137400.1	:

Description

No Description!

Coordinates

chr1D:-:185797304..185798350

Molecular Weight (calculated)

38001.9 Da

IEP (calculated)

6.299

GRAVY (calculated)

-0.073

Length

348 amino acids

Sequence
(BLAST)

001: MQTGLKAVDS LVPIGRGQRE LIIGDRQTGK TAIAIDTILN QKQMNSRGTN ESETLYCVYV AIGQKRSTVA QLVQILSEAN ALEYSILVAA TALDPAPLQF
101: LAPYSGCAMG EYFRDNGMHT LIIYDDLSKQ AVAYRHMSLL LRRPPGREAF PGDVFYLHSR LLERAAKRSD QTGAGSSTAL PVIETQAGDV SAYIPTNVIS
201: ITDGQICLEI ELFYPGIRPA INVGLSVSRV GSAAQLKAMK QVAAFAQFGS DLDAATQALL NRGARLTEVP KQPQYEPLPI EKQIVVIYAA VNGFCDRMQL
301: DIISQYEKAI LSTINPELQK SFLEKGGLTN ERKMEPDASL KESTLPYL

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.