Factsheet for TraesCS1D01G070400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G011000.1	Wheat	cytosol	90.8	94.07
TraesCS5D01G459400.1	Wheat	cytosol	92.29	87.91
TraesCSU01G174100.1	Wheat	cytosol	90.8	86.08
TraesCS1D01G193400.1	Wheat	cytosol	57.21	79.31
AGP50752	Barley	cytosol	92.54	73.81
Bra041120.1-P	Field mustard	cytosol	92.29	73.61
HORVU4Hr1G045340.3	Barley	cytosol	92.29	73.61
HORVU6Hr1G049170.4	Barley	plastid	92.54	73.37
TraesCS5D01G458900.1	Wheat	plastid	91.29	72.82
CAA33993	Rice	plasma membrane, plastid	91.54	72.58
TraesCS1D01G181000.1	Wheat	cytosol	89.55	71.43
TraesCS7B01G395800.1	Wheat	cytosol	73.38	68.93
TraesCS1D01G196100.1	Wheat	cytosol	34.33	50.55
TraesCS4D01G279700.1	Wheat	cytosol	16.17	49.62
TraesCS2D01G089900.1	Wheat	golgi	51.24	43.74
TraesCS4D01G137800.1	Wheat	cytosol	52.24	41.26
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	35.32	40.8
TraesCS2D01G230100.1	Wheat	cytosol	51.49	40.67
TraesCS3D01G226800.1	Wheat	cytosol	50.5	40.6
TraesCS1D01G193600.1	Wheat	cytosol	52.99	40.34
TraesCS5D01G079600.1	Wheat	cytosol	25.12	38.7
TraesCS4D01G042900.1	Wheat	cytosol	15.67	32.98
TraesCS6D01G226200.1	Wheat	mitochondrion	16.42	30.28
Solyc03g033440.1.1	Tomato	nucleus, plastid	8.21	30.28
TraesCS5D01G079500.1	Wheat	golgi	15.92	29.22
KRH04726	Soybean	cytosol	10.45	28.97
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	11.44	20.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.30.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_F1_a
InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0032559
GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:1902600	InterPro:IPR023366	HAMAP:MF_01346
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PANTHER:PTHR42875	SUPFAM:SSF50615	SUPFAM:SSF52540
TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS1D01G070400	EnsemblPlants:TraesCS1D01G070400.1	TIGR:cd01132	:	:

Description

No Description!

Coordinates

chr1D:-:51828944..51830152

Molecular Weight (calculated)

43406.0 Da

IEP (calculated)

8.696

GRAVY (calculated)

0.135

Length

402 amino acids

Sequence
(BLAST)

001: MATLRVDEIH KILLERIEQY NRKVGIENIG RVVQVGDGIA RIIGLGEIMS GELVEFAEGT RGIALNLESK NVGIVLMGDG LMIQEGNFVK ATGRIARIPV
101: SEAYLGRVVN ALAKPIDGKG EIIASESRLI ESPAPSIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDIILNQKGQ GVICVYVAIG
201: QRASSVAQVV TTFHEEGAME YTIVVAKMAD SPATLQYLAT YTGAALAEYF MYRERHTLII YDDLSKQAQA YRQMSLLLTR PPGHEAYPGD VFYLHSRLLE
301: RAAKLNSLLG EGSMTALPIV ETQSGDISAY IPTNVISITD GQIFLSADLF NAGIRPATNV GISVSRVGSA AQIKAMKQVA GKIGTSAIRR VTSLCTIRLC
401: SR

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.