Factsheet for TraesCS5D01G459400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G011000.1	Wheat	cytosol	89.81	97.68
TraesCSU01G174100.1	Wheat	cytosol	97.16	96.7
TraesCS1D01G070400.1	Wheat	cytosol	87.91	92.29
TraesCS1D01G193400.1	Wheat	cytosol	57.82	84.14
AGP50752	Barley	cytosol	99.05	82.94
Bra041120.1-P	Field mustard	cytosol	98.82	82.74
HORVU4Hr1G045340.3	Barley	cytosol	98.82	82.74
HORVU6Hr1G049170.4	Barley	plastid	99.05	82.45
TraesCS5D01G458900.1	Wheat	plastid	97.87	81.94
CAA33993	Rice	plasma membrane, plastid	98.1	81.66
TraesCS1D01G181000.1	Wheat	cytosol	95.97	80.36
TraesCS7B01G395800.1	Wheat	cytosol	80.33	79.21
TraesCS4D01G042900.1	Wheat	cytosol	24.17	53.4
TraesCS1D01G196100.1	Wheat	cytosol	32.94	50.92
TraesCS4D01G279700.1	Wheat	cytosol	15.17	48.85
TraesCS2D01G089900.1	Wheat	golgi	53.32	47.77
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	37.44	45.4
TraesCS4D01G137800.1	Wheat	cytosol	54.5	45.19
TraesCS1D01G193600.1	Wheat	cytosol	55.45	44.32
TraesCS2D01G230100.1	Wheat	cytosol	53.32	44.2
TraesCS3D01G226800.1	Wheat	cytosol	52.37	44.2
TraesCS6D01G226200.1	Wheat	mitochondrion	20.14	38.99
TraesCS5D01G079600.1	Wheat	cytosol	23.93	38.7
TraesCS5D01G079500.1	Wheat	golgi	19.91	38.36
KRH04726	Soybean	cytosol	12.8	37.24
Solyc03g033440.1.1	Tomato	nucleus, plastid	7.82	30.28
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	11.14	20.43

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:2.40.30.20	Gene3D:3.40.50.300	MapMan:35.1
InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034
GO:GO:0046933	GO:GO:1902600	InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase
PFAM:PF00006	PFAM:PF00306	PFAM:PF02874	ScanProsite:PS00152	PANTHER:PTHR42875	SUPFAM:SSF47917
SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS5D01G459400	EnsemblPlants:TraesCS5D01G459400.1	TIGR:cd01132
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:503341255..503342808

Molecular Weight (calculated)

45799.6 Da

IEP (calculated)

9.064

GRAVY (calculated)

0.027

Length

422 amino acids

Sequence
(BLAST)

001: MATLRVDEIH KILRERIEQY NRKVGIENIG RVVQVGDGIA RIIGLGEIMS GELVEFAEGT RGIALNLESK NVGIVLMGDG LMIQEGSFVK ATGRSAQIPV
101: SEAYLGRVVN ALAKPIDGKG EIIASESRLI ESPAPSIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQKGQ GVICVYVAIG
201: QRASSVAQVV TTFHEEGAME YTIVVAEMAD SPATLQYLAP YTGAALAEYF MYRERHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLNSLLG EGSMTALPIV QTQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKSKLELAQF AELQAFAQFA
401: SALDKTSQNQ LARGRRLREF LK

Best Arabidopsis Sequence Match ( ATCG00120.1 )
(BLAST)

001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV

Arabidopsis Description

ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.