Factsheet for TraesCS5D01G011000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G070400.1	Wheat	cytosol	94.07	90.8
TraesCS5D01G459400.1	Wheat	cytosol	97.68	89.81
TraesCSU01G174100.1	Wheat	cytosol	96.39	88.21
TraesCS1D01G193400.1	Wheat	cytosol	61.86	82.76
AGP50752	Barley	cytosol	97.94	75.4
Bra041120.1-P	Field mustard	cytosol	97.68	75.2
HORVU4Hr1G045340.3	Barley	cytosol	97.68	75.2
HORVU6Hr1G049170.4	Barley	plastid	97.94	74.95
TraesCS5D01G458900.1	Wheat	plastid	96.65	74.4
CAA33993	Rice	plasma membrane, plastid	97.16	74.36
TraesCS1D01G181000.1	Wheat	cytosol	95.36	73.41
TraesCS7B01G395800.1	Wheat	cytosol	78.09	70.79
TraesCS1D01G196100.1	Wheat	cytosol	35.05	49.82
TraesCS4D01G279700.1	Wheat	cytosol	15.98	47.33
TraesCS2D01G089900.1	Wheat	golgi	53.09	43.74
TraesCS4D01G137800.1	Wheat	cytosol	54.64	41.65
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	37.11	41.38
TraesCS1D01G193600.1	Wheat	cytosol	55.41	40.72
TraesCS2D01G230100.1	Wheat	cytosol	53.35	40.67
TraesCS3D01G226800.1	Wheat	cytosol	52.32	40.6
TraesCS5D01G079600.1	Wheat	cytosol	25.0	37.16
TraesCS4D01G042900.1	Wheat	cytosol	17.78	36.13
TraesCS6D01G226200.1	Wheat	mitochondrion	18.04	32.11
TraesCS5D01G079500.1	Wheat	golgi	17.53	31.05
Solyc03g033440.1.1	Tomato	nucleus, plastid	7.99	28.44
KRH04726	Soybean	cytosol	10.57	28.28
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	11.86	20.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.30.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_F1_a
InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787
GO:GO:0032559	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933	GO:GO:1902600	InterPro:IPR023366
HAMAP:MF_01346	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	ScanProsite:PS00152	PANTHER:PTHR42875
SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR00962	EnsemblPlantsGene:TraesCS5D01G011000	EnsemblPlants:TraesCS5D01G011000.1	TIGR:cd01132

Description

No Description!

Coordinates

chr5D:-:6249909..6251462

Molecular Weight (calculated)

41858.0 Da

IEP (calculated)

6.173

GRAVY (calculated)

0.131

Length

388 amino acids

Sequence
(BLAST)

001: MATLRVDEIH KILRERIEQY NRKVGIENIG CVVQVGDGIA RIIGLGEIMS GELVEFAEGT RGIALNLESK NVGIVLMGDG LMIQEGSFVK ATGRIAQIPV
101: SEAYLGRVVN ALAKPIDGKG EIIASESCLI ESPAPCIISR RSIYEPLQTG LIAIDSMIPI GRGQRELIIG DRETGKTAVA TDTILNQKGQ GVICVYVAIG
201: QRASSVAQVV TTFHEEGAME YTIVVAEMAD SPATLQYLAP YTGAALAEYF MYRERHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLNSLLG EGSMTTLPIV ETQSGDVSAY IPTNVISITN GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKSKLELA

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.