Factsheet for TraesCS4D01G279700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g027010.1.1	Tomato	cytosol	45.8	83.33
HORVU7Hr1G072410.1	Barley	cytosol	80.92	79.1
Bra040490.1-P	Field mustard	cytosol	53.44	70.71
CDY45669	Canola	cytosol	25.95	54.84
OQU84776	Sorghum	cytosol	32.06	54.55
TraesCS7A01G097500.1	Wheat	cytosol	96.18	53.85
CDY37772	Canola	cytosol	19.08	52.08
TraesCS5D01G079600.1	Wheat	cytosol	93.13	46.74
TraesCS1D01G196100.1	Wheat	cytosol	96.95	46.52
TraesCS2D01G089900.1	Wheat	golgi	95.42	26.54
TraesCS2D01G230100.1	Wheat	cytosol	96.18	24.75
TraesCS4D01G137800.1	Wheat	cytosol	93.89	24.16
TraesCS3D01G226800.1	Wheat	cytosol	91.6	24.0
TraesCS1D01G193600.1	Wheat	cytosol	96.18	23.86
Zm00001d016118_P001	Maize	cytosol	93.89	22.49
TraesCS1D01G070400.1	Wheat	cytosol	49.62	16.17
TraesCS5D01G011000.1	Wheat	cytosol	47.33	15.98
TraesCS5D01G459400.1	Wheat	cytosol	48.85	15.17
TraesCS5D01G458900.1	Wheat	plastid	48.85	12.7
TraesCS1D01G181000.1	Wheat	cytosol	47.33	12.3
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	7.63	4.35
TraesCS1D01G193400.1	Wheat	cytosol	6.87	3.1
TraesCS4D01G042900.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G079500.1	Wheat	golgi	0.0	0.0
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	0.0	0.0
TraesCS6D01G226200.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4D01G279700.1	EnsemblPlantsGene:TraesCS4D01G279700	Gene3D:2.40.30.20	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0046034	GO:GO:1902600	InterPro:ATP_synth_asu-like_sf
InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:IPR023366	InterPro:P-loop_NTPase	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14
PANTHER:PTHR43089	PFAM:PF02874	SUPFAM:SSF50615	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:-:450898703..450899098

Molecular Weight (calculated)

14065.0 Da

IEP (calculated)

5.781

GRAVY (calculated)

-0.064

Length

131 amino acids

Sequence
(BLAST)

001: MTNFYTNFQV DEIGRVASVG DGIARVYGLN EIQAGEMVEF ASGVKGIALN LENENVGIVV FGSDTTIKEG DLVKRTRSIV DVPAGKAMLG RVVNALGVPI
101: DGKGALSDHE RRRVEVKAPG IIERKSVHEP M

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.