Factsheet for TraesCS5D01G079500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G226200.1	Wheat	mitochondrion	85.39	85.78
TraesCS1D01G137400.1	Wheat	cytosol, mitochondrion, plastid	86.76	54.6
TraesCS4D01G137800.1	Wheat	cytosol	93.15	40.08
TraesCS2D01G230100.1	Wheat	cytosol	91.78	39.49
TraesCS4D01G042900.1	Wheat	cytosol	33.79	38.74
TraesCS1D01G193600.1	Wheat	cytosol	93.15	38.64
TraesCS3D01G226800.1	Wheat	cytosol	87.67	38.4
TraesCS2D01G089900.1	Wheat	golgi	75.34	35.03
TraesCS1D01G193400.1	Wheat	cytosol	32.88	24.83
TraesCS5D01G458900.1	Wheat	plastid	46.12	20.04
TraesCS5D01G459400.1	Wheat	cytosol	38.36	19.91
TraesCS1D01G181000.1	Wheat	cytosol	43.84	19.05
TraesCS5D01G011000.1	Wheat	cytosol	31.05	17.53
TraesCS1D01G070400.1	Wheat	cytosol	29.22	15.92
TraesCS2D01G492000.1	Wheat	mitochondrion, peroxisome	13.24	12.61
TraesCS5D01G079600.1	Wheat	cytosol	2.28	1.92
TraesCS1D01G196100.1	Wheat	cytosol	0.0	0.0
TraesCS4D01G279700.1	Wheat	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATP_synth_asu_C
InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	InterPro:IPR038376	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306	PANTHER:PTHR43089
SUPFAM:SSF47917	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G079500	EnsemblPlants:TraesCS5D01G079500.1	:	:

Description

No Description!

Coordinates

chr5D:-:80017922..80018581

Molecular Weight (calculated)

24036.2 Da

IEP (calculated)

8.049

GRAVY (calculated)

-0.086

Length

219 amino acids

Sequence
(BLAST)

001: MSLLLRRPPG REAFPGDVFY LHSHLLERAA KRSDQTGAGI SSALPVIETQ AGDVLAYIPT NVISITDGQI CLEIELFYHR IRPAINVGLP ASRVGSVAQL
101: KAMKQVCGSS KLELAQYREV VAFAQFGSDL DAATQALLNR GARLTEVPKQ PQYEPLPIEK QIVVIYAAVN GFCAQMPLDR ISQYEKAILS TINPELQKSF
201: LEKGGLTNER KMEPDASLK

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.