CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37772	Canola	cytosol	41.94	54.17
OQU84776	Sorghum	cytosol	54.84	44.16
HORVU4Hr1G059400.2	Barley	cytosol	54.84	29.06
TraesCS4D01G279700.1	Wheat	cytosol	54.84	25.95
TraesCS4B01G146700.1	Wheat	cytosol	53.23	22.3
Solyc07g027010.1.1	Tomato	cytosol	22.58	19.44
TraesCS7A01G097500.1	Wheat	cytosol	54.84	14.53
TraesCS1D01G196100.1	Wheat	cytosol	56.45	12.82
CDY45501	Canola	cytosol	62.9	7.69
CDY45503	Canola	cytosol	62.9	7.69
TraesCS2D01G089900.1	Wheat	golgi	53.23	7.01
TraesCS2D01G230100.1	Wheat	cytosol	53.23	6.48
Zm00001d016118_P001	Maize	cytosol	54.84	6.22
CDY21186	Canola	cytosol	29.03	5.79
CDY22714	Canola	mitochondrion, plastid	0.0	0.0
TraesCS4B01G146800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY45669	EnsemblPlantsGene:GSBRNA2T00082440001	Gene3D:3.40.50.300	PANTHER:PTHR43089	PANTHER:PTHR43089:SF2	ProteinID:CDY45669
ProteinID:CDY45669.1	UniParc:UPI0004EE802D	UniProt:A0A078I8E3	MapMan:35.1	:	:

Description

BnaC09g32110DBnaC09g32110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8E3]

Coordinates

chrLK032632:+:159704..159892

Molecular Weight (calculated)

6949.5 Da

IEP (calculated)

10.107

GRAVY (calculated)

-0.669

Length

62 amino acids

Sequence
(BLAST)

1: MPGRVVDAMG VPIDGREALS DHEQRRVEVK APGILERKSV HEKKHELSLG PFKPQLNLIK PN

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.