Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G038940.1 Barley mitochondrion 17.84 36.26
VIT_17s0053g00440.t01 Wine grape cytosol 16.22 28.04
PGSC0003DMT400021839 Potato cytosol 19.46 12.9
KRH57912 Soybean nucleus 17.3 11.64
CDY45501 Canola cytosol 21.08 7.69
CDY45503 Canola cytosol 21.08 7.69
CDY21186 Canola cytosol 2.7 1.61
CDY37772 Canola cytosol 0.0 0.0
CDY45669 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00190+3.6.3.14KEGG:00195+3.6.3.14Gene3D:3.40.50.12240Gene3D:3.90.1170.10MapMan:35.1GO:A0A078GBI9
UniProt:A0A078GBI9InterPro:ATP_synth_asu_CInterPro:ATPase_a/bsu_ASEnsemblPlants:CDY22714ProteinID:CDY22714ProteinID:CDY22714.1
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003735GO:GO:0003824
GO:GO:0005198GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006139GO:GO:0006412GO:GO:0006754
GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009987GO:GO:0015986GO:GO:0015992GO:GO:0016020GO:GO:0016787
GO:GO:0019538GO:GO:0019843GO:GO:0032559GO:GO:0045261GO:GO:0046034GO:GO:0046933
GO:GO:0099132EnsemblPlantsGene:GSBRNA2T00019387001InterPro:IPR036920InterPro:P-loop_NTPasePFAM:PF00252PFAM:PF00306
PRINTS:PR00060ScanProsite:PS00152ScanProsite:PS00586PANTHER:PTHR42875MetaCyc:PWY-7219InterPro:Ribosomal_L10e/L16
InterPro:Ribosomal_L10e/L16_sfInterPro:Ribosomal_L16InterPro:Ribosomal_L16_CSSUPFAM:SSF52540SUPFAM:SSF54686UniParc:UPI0004EF1161
SEG:seg:::::
Description
BnaC08g43480DBnaC08g43480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBI9]
Coordinates
chrLK032134:+:620973..622011
Molecular Weight (calculated)
20728.6 Da
IEP (calculated)
11.900
GRAVY (calculated)
-0.141
Length
185 amino acids
Sequence
(BLAST)
001: MKVRYMTTTA TSTPLPFNIF NITSRQIEAG RRAMTRNIRR GGKIWVRIFP DKLSADLFNA GIRPAINVGI SVSRVGSAAQ IKAMKQVAGK LKLELAQLGI
101: MMAQLAQLAQ LASRKGRRKE ALANRHNHRR WGRYGTEPAL ITWINIKPTY LLCVVSLHAS SIHYPEVTAI LNSSSREDTR LLYSL
Best Arabidopsis Sequence Match ( ATCG00120.1 )
(BLAST)
001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV
Arabidopsis Description
ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.