Factsheet for HORVU6Hr1G038940.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0053g00440.t01	Wine grape	cytosol	45.05	38.32
HORVU1Hr1G038040.1	Barley	cytosol, mitochondrion	67.03	32.11
CDY22714	Canola	mitochondrion, plastid	36.26	17.84
PGSC0003DMT400021839	Potato	cytosol	52.75	17.2
HORVU3Hr1G080710.1	Barley	cytosol	19.78	15.38
KRH57912	Soybean	nucleus	42.86	14.18
AGP50752	Barley	cytosol	74.73	13.49
HORVU4Hr1G045340.3	Barley	cytosol	74.73	13.49
HORVU6Hr1G049170.4	Barley	plastid	74.73	13.41
BAV58156	Barley	cytosol, plasma membrane	51.65	9.23
HORVU0Hr1G019950.1	Barley	mitochondrion	51.65	8.95
HORVU1Hr1G037870.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G019920.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G051340.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G059180.3	Barley	mitochondrion	0.0	0.0
HORVU4Hr1G014040.1	Barley	mitochondrion	0.0	0.0
HORVU4Hr1G014050.1	Barley	mitochondrion	0.0	0.0
HORVU4Hr1G059400.2	Barley	cytosol	0.0	0.0
HORVU7Hr1G072410.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G009770.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G038940.1	EnsemblPlantsGene:HORVU6Hr1G038940	Gene3D:1.20.150.20	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf
InterPro:IPR038376	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	PANTHER:PTHR42875	PFAM:PF00306	SEG:seg
SUPFAM:SSF47917	UniParc:UPI000B464BC2	UniProt:A0A287TZE7	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr6H:-:200721921..200722555

Molecular Weight (calculated)

10220.7 Da

IEP (calculated)

11.215

GRAVY (calculated)

-0.042

Length

91 amino acids

Sequence
(BLAST)

1: MKIHSINVGI YVLRVGSAAQ IKAMKQVAGK SKLELAQFAE LQAFAQFASA LDKTSQNQLA RGRRLREFLK QIQFGKLAME ILCGQRFIHT Q

Best Arabidopsis Sequence Match ( ATCG00120.1 )
(BLAST)

001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV

Arabidopsis Description

ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.