Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G037870.1 | Barley | cytosol | 59.18 | 36.25 |
| Solyc06g072540.1.1 | Tomato | nucleus | 32.65 | 14.81 |
| HORVU1Hr1G051340.1 | Barley | cytosol | 16.33 | 12.31 |
| HORVU3Hr1G059180.3 | Barley | mitochondrion | 12.24 | 7.69 |
| AGP50752 | Barley | cytosol | 67.35 | 6.55 |
| HORVU6Hr1G049170.4 | Barley | plastid | 67.35 | 6.51 |
| HORVU4Hr1G045340.3 | Barley | cytosol | 65.31 | 6.35 |
| BAV58156 | Barley | cytosol, plasma membrane | 61.22 | 5.89 |
| HORVU0Hr1G019950.1 | Barley | mitochondrion | 61.22 | 5.71 |
| HORVU1Hr1G038040.1 | Barley | cytosol, mitochondrion | 12.24 | 3.16 |
| TraesCS5A01G207900.1 | Wheat | mitochondrion | 12.24 | 2.65 |
| HORVU4Hr1G059400.2 | Barley | cytosol | 4.08 | 1.71 |
| HORVU4Hr1G014050.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU4Hr1G014040.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU6Hr1G038940.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU3Hr1G080710.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G072410.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU0Hr1G009770.1 | Barley | cytosol | 0.0 | 0.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G019920.1 | EnsemblPlantsGene:HORVU0Hr1G019920 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd | InterPro:P-loop_NTPase | KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 | PANTHER:PTHR42875 |
| PFAM:PF00006 | SUPFAM:SSF52540 | UniParc:UPI000B47B9D6 | UniProt:A0A287E5S5 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchrUn:+:104749629..104750470
Molecular Weight (calculated)
5608.9 Da
IEP (calculated)
11.857
GRAVY (calculated)
-1.045
Length
49 amino acids
Sequence
(BLAST)
(BLAST)
1: MIPIGRGQRE FIIGDRQTGK TAVATDTIRK KKGQDVRRTR ASLHERKCK
001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV
Arabidopsis Description
ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.