Factsheet for HORVU6Hr1G049170.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	mitochondrion

plastid: 15682463
plastid: 16758444
plastid: 21440687

msms PMID: 16758444 doi

B Granvogl, V Reisinger, LA Eichacker

Department für Biologie I, Ludwig-Maximilians-Universität, München, Germany.

msms PMID: 15682463 doi

C Ciambella, P Roepstorff, EM Aro, L Zolla

Department of Environmental Sciences, University of Tuscia, Viterbo, Italy.

msms PMID: 21440687 doi

M Plöscher, V Reisinger, LA Eichacker

TRION Pharma GmbH, Munich, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AGP50752	Barley	cytosol	99.41	100.0
HORVU4Hr1G045340.3	Barley	cytosol	99.21	99.8
Bra041120.1-P	Field mustard	cytosol	98.82	99.4
TraesCS5D01G459400.1	Wheat	cytosol	82.45	99.05
TraesCS7B01G395800.1	Wheat	cytosol	83.43	98.83
TraesCS5D01G458900.1	Wheat	plastid	97.83	98.41
TraesCS5D01G011000.1	Wheat	cytosol	74.95	97.94
TraesCSU01G174100.1	Wheat	cytosol	81.66	97.64
HORVU1Hr1G037870.1	Barley	cytosol	15.38	97.5
CAA33993	Rice	plasma membrane, plastid	97.44	97.44
TraesCS1D01G181000.1	Wheat	cytosol	96.45	97.02
TraesCS4D01G042900.1	Wheat	cytosol	36.09	95.81
HORVU1Hr1G038040.1	Barley	cytosol, mitochondrion	35.7	95.26
TraesCS1D01G070400.1	Wheat	cytosol	73.37	92.54
HORVU0Hr1G009770.1	Barley	cytosol	17.16	90.62
HORVU4Hr1G014040.1	Barley	mitochondrion	16.57	89.36
HORVU4Hr1G014050.1	Barley	mitochondrion	16.57	89.36
HORVU6Hr1G038940.1	Barley	mitochondrion	13.41	74.73
HORVU3Hr1G059180.3	Barley	mitochondrion	11.24	73.08
HORVU0Hr1G019920.1	Barley	cytosol	6.51	67.35
HORVU3Hr1G080710.1	Barley	cytosol	13.41	58.12
HORVU1Hr1G051340.1	Barley	cytosol	7.1	55.38
BAV58156	Barley	cytosol, plasma membrane	50.3	50.1
TraesCS5A01G207900.1	Wheat	mitochondrion	22.09	49.56
HORVU0Hr1G019950.1	Barley	mitochondrion	50.3	48.57
HORVU4Hr1G059400.2	Barley	cytosol	10.06	43.59
KRH04726	Soybean	cytosol	11.83	41.38
HORVU7Hr1G072410.1	Barley	cytosol	10.85	41.04
Solyc03g033440.1.1	Tomato	nucleus, plastid	6.51	30.28

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:1.1.9.2.1	Gene3D:1.20.150.20	Gene3D:2.40.30.20	Gene3D:3.40.50.300
EntrezGene:4525126	UniProt:A0A287U4Q4	InterPro:ATP_synth_F1_a	InterPro:ATP_synth_F1_asu	InterPro:ATP_synth_asu-like_sf	InterPro:ATP_synth_asu_C
InterPro:ATP_synth_asu_C_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009987
GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261
GO:GO:0046034	GO:GO:0046933	GO:GO:0099132	GO:GO:1902600	EnsemblPlantsGene:HORVU6Hr1G049170	EnsemblPlants:HORVU6Hr1G049170.4
InterPro:IPR023366	InterPro:IPR038376	HAMAP:MF_01346	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF00306
PFAM:PF02874	ScanProsite:PS00152	PANTHER:PTHR42875	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540
TIGRFAMs:TIGR00962	UniParc:UPI000B46E53E	SEG:seg	:	:	:

Description

ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287U4Q4]

Coordinates

chrchr6H:+:299494602..299496386

Molecular Weight (calculated)

55643.4 Da

IEP (calculated)

7.068

GRAVY (calculated)

-0.077

Length

507 amino acids

Sequence
(BLAST)

001: MATLRVDEIH KILRERIEQY NRKVGIENIG RVVQVGDGIA RIIGLGEIMS GELVQFAEGT RGIALNLESK NVGIVLMGDG LMIQEGSFVK ATGRIAQIPV
101: SEAYLGRVVN ALAKPIDGKG EIIASESRLI ESPAPSIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQKGQ GVICVYVAIG
201: QRASSVAQVV TTFHEEGAME YTIVVAEMAD SPATLQYLAP YTGAALAEYF MYRERHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLNSLLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKSKLELAQF AELQAFAQFA
401: SALDKTSQNQ LARGRRLREL LKQSQANPLP VEEQIATIYT GTRGYLDSLE IEQVNKFLDE LRKHLKDTKP QFQEIISSSK TFTEQAEILL KEAIQEQLER
501: FSLQKNC

Best Arabidopsis Sequence Match ( ATCG00120.1 )
(BLAST)

001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV

Arabidopsis Description

ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.