Factsheet for VIT_17s0053g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G038940.1	Barley	mitochondrion	38.32	45.05
CDY22714	Canola	mitochondrion, plastid	28.04	16.22
PGSC0003DMT400021839	Potato	cytosol	35.51	13.62
KRH57912	Soybean	nucleus	26.17	10.18
VIT_00s0733g00010.t01	Wine grape	extracellular	34.58	8.2

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.20.150.20	MapMan:35.2	InterPro:ATP_synth_asu_C	InterPro:ATP_synth_asu_C_sf
ProteinID:CCB58796	ProteinID:CCB58796.1	UniProt:F6HVT3	EMBL:FN596258	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	InterPro:IPR038376
PFAM:PF00306	PANTHER:PTHR42875	SUPFAM:SSF47917	UniParc:UPI000210A1AC	ArrayExpress:VIT_17s0053g00440	EnsemblPlantsGene:VIT_17s0053g00440
EnsemblPlants:VIT_17s0053g00440.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:+:15139137..15144040

Molecular Weight (calculated)

12075.0 Da

IEP (calculated)

6.942

GRAVY (calculated)

0.202

Length

107 amino acids

Sequence
(BLAST)

001: MIMLELHELM EVVMKLLSLE NFSSMFSKVG SAAQIKAMKQ VAGKSKLELA QFAELEAFAQ FAFDLDKATH SQLLIDGNGR FMKVCCLNIS LVSNPFHQIR
101: EHDIRTL

Best Arabidopsis Sequence Match ( ATCG00120.1 )
(BLAST)

001: MVTIRADEIS NIIRERIEQY NREVTIVNTG TVLQVGDGIA RIYGLDEVMA GELVEFEEGT IGIALNLESN NVGVVLMGDG LMIQEGSSVK ATGKIAQIPV
101: SEAYLGRVIN ALANPIDGRG KISASESRLI ESPAPGIISR RSVYEPLQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQQGQ NVICVYVAIG
201: QKASSVAQVV TSLQERGAME YTIVVAETAD SPATLQYLAP YTGAALAEYF MYREQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE
301: RAAKLSSQLG EGSMTALPIV ETQSGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFSQFS
401: SDLDKATQNQ LARGQRLREL LKQSQSAPLT VEEQIMTIYT GTNGYLDGLE IGQVRKFLVQ LRTYLKTNKP QFQEIIASTK TLTAEAESFL KEGIQEQLER
501: FLLQEKV

Arabidopsis Description

ATPAATP synthase subunit alpha, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.