CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45669	Canola	cytosol	44.16	54.84
CDY37772	Canola	cytosol	32.47	52.08
TraesCS4D01G279700.1	Wheat	cytosol	54.55	32.06
TraesCS7A01G097500.1	Wheat	cytosol	83.12	27.35
Bra040490.1-P	Field mustard	cytosol	32.47	25.25
HORVU7Hr1G072410.1	Barley	cytosol	42.86	24.63
Solyc07g027010.1.1	Tomato	cytosol	22.08	23.61
TraesCS1D01G196100.1	Wheat	cytosol	83.12	23.44
TraesCS3B01G512400.1	Wheat	cytosol	87.01	19.2
TraesCS2D01G089900.1	Wheat	golgi	85.71	14.01
TraesCS2D01G230100.1	Wheat	cytosol	84.42	12.77
Zm00001d016118_P001	Maize	cytosol	84.42	11.88

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1Z5RN14	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992
GO:GO:0016020	GO:GO:0016787	GO:GO:0032559	GO:GO:0045261	GO:GO:0046034	GO:GO:0046933
GO:GO:0099132	EnsemblPlants:OQU84776	ProteinID:OQU84776	ProteinID:OQU84776.1	InterPro:P-loop_NTPase	PANTHER:PTHR43089
EnsemblPlantsGene:SORBI_3004G120150	SUPFAM:SSF52540	UniParc:UPI000B8B9F42	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:13038795..13039158

Molecular Weight (calculated)

8461.5 Da

IEP (calculated)

10.879

GRAVY (calculated)

-0.456

Length

77 amino acids

Sequence
(BLAST)

1: MLGRVVDALG VPIDGKGALS DHERRRVKVK APGIIERKSV HEPMQTGLKV VDSLVPIGRG QRELIIGGRQ DKLEKQQ

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.