Factsheet for Zm00001d016118_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G146700.1	Wheat	cytosol	25.41	93.92
TraesCS4D01G279700.1	Wheat	cytosol	22.49	93.89
Solyc07g027010.1.1	Tomato	cytosol	11.52	87.5
OQU84776	Sorghum	cytosol	11.88	84.42
HORVU4Hr1G059400.2	Barley	cytosol	17.55	82.05
TraesCS7A01G097500.1	Wheat	cytosol	34.73	81.2
Bra040490.1-P	Field mustard	cytosol	13.53	74.75
TraesCS1D01G196100.1	Wheat	cytosol	36.2	72.53
CDY37772	Canola	cytosol	4.94	56.25
CDY45669	Canola	cytosol	6.22	54.84
TraesCS2D01G089900.1	Wheat	golgi	39.31	45.65
Zm00001d040880_P001	Maize	plasma membrane	42.05	45.28
TraesCS2D01G230100.1	Wheat	cytosol	40.95	44.01
TraesCS4B01G146800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	6.4	11.95

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:2.40.30.20	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6H5I4
ProteinID:AQK70081.1	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005840	GO:GO:0006139
GO:GO:0006412	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015935	GO:GO:0015992	GO:GO:0019538	GO:GO:0046034	GO:GO:1902600	InterPro:IPR023366
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PANTHER:PTHR43089	SUPFAM:SSF50615	SUPFAM:SSF52540
UniParc:UPI0008445A3C	EnsemblPlantsGene:Zm00001d016118	EnsemblPlants:Zm00001d016118_P001	EnsemblPlants:Zm00001d016118_T001	SEG:seg	:

Description

ATP synthase subunit 1

Coordinates

chr5:+:145422985..145425146

Molecular Weight (calculated)

59757.9 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.284

Length

547 amino acids

Sequence
(BLAST)

001: MEFSPRAAEL MTLLESRMIN FYTNLKVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKYVHEPMQT GLKAVDSLVP IGHGQRELII EDRQTGKTAI AIDTILNQKQ MNSRKTLGQI
201: HLRKRITAKN RTPRSHFSFS KVQYRSHKGA SPISSGDANA SPTRGPPTLN CATFLLLADR GSLVHSSGFP AASGSGPSLN PDVASTPSSS FFQGVGSALE
301: AATAPAEPGE EVQQGAIEAL NVAALPGVPQ DELFGAISQN LGIALPQVPA APPAAPIHQD IEPMIQSAKS SIYNNLTTLH GSMDPKEATE LMETIFYKKS
401: QILQELERLN GLINGPILWK DGWDTIRNPQ SGKEYQPNTL DMIWRSLQRY GLNSDYYKNF LNERVHTMEN EKSTKLKLED LTIAKLDSLN QAKLIVGRLE
501: LENEIRIIKK ELRYLDFSSM KKVGKCIAMI GYKSQNSSYT MLENKLI

Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)

001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI

Arabidopsis Description

ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.