Factsheet for TraesCSU01G147900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G412900.1	Wheat	cytosol	98.26	98.26
TraesCS3A01G383800.1	Wheat	cytosol	97.92	97.92
TraesCS1D01G193400.1	Wheat	cytosol	96.53	95.86
TraesCS1A01G113000.1	Wheat	cytosol	92.71	92.07
TraesCSU01G234000.1	Wheat	cytosol	59.03	59.44
TraesCSU01G174100.1	Wheat	cytosol	82.64	56.13
PGSC0003DMT400035968	Potato	cytosol, mitochondrion, nucleus	15.28	51.76
Solyc08g045710.1.1	Tomato	nucleus	4.17	35.29
TraesCSU01G248800.1	Wheat	mitochondrion	26.39	33.63
PGSC0003DMT400057252	Potato	extracellular	28.12	30.45

Protein Annotations

EnsemblPlants:TraesCSU01G147900.1	EnsemblPlantsGene:TraesCSU01G147900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_a/bsu_AS	InterPro:P-loop_NTPase	KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14
PANTHER:PTHR42875	PFAM:PF00006	ScanProsite:PS00152	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chrUn:+:171052733..171054689

Molecular Weight (calculated)

31527.0 Da

IEP (calculated)

5.749

GRAVY (calculated)

0.061

Length

288 amino acids

Sequence
(BLAST)

001: MKKASSGCKL EELERMEESL TVFSLNYSNF LFEKAEIAQF ERGLSFIGLI AIDSMIPIGR GQREFIIRDR QTGKTAVATD TILNQKGQGV ICVYVAIGQR
101: ASSVAQVVTT FHEEGAMEYT IVVAEMADSP ATLQYLAPYT GAALAEYFMY RERHTLIIYD DLSKQAQAYR QMSLLLSPGR EAYPGDVFYL HSRLLERAAK
201: LNSLLGEGSM TALPIVETQS GDVSAYIPTN VISITDGQIF LSADLFHAGI RPAINVGISV SRVGSAAQIK AMKQVAGKSK LELAQFAE

Best Arabidopsis Sequence Match ( AT2G07698.1 )
(BLAST)

001: MITRLFAQLV SLSIVTYWND AIVATNFSWL FITFFVMTFT FRTFSRYFKK PIIWTFYFFL CLIAFLLLWA ARIHINILFS FAFGDVYSFF MAGVFLFYGF
101: GELLPIGSDS DVGEASWVVN PATGASGSGG NGWTESAAND PAREVSLAPF PLQLTHPVPF PAEPGSPDPV SPPPPIASFY SRIERAESLH AGNIELAEDL
201: QRIQEMERNL ENERSPYRGR ELAARIDWEV RELEGKVARN RAWDMVRDAQ LDIWRQGLDQ ELVRQQENES RLEERRAAEL TNLFESRIRN FYANFQVDEI
301: GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR
401: VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE
501: YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI
601: ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV
701: PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK ERALALI

Arabidopsis Description

ATPase, F1 complex, alpha subunit protein [Source:UniProtKB/TrEMBL;Acc:F4IMB5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.