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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 4
  • cytosol 1
  • plastid 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular, mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400057252 Potato extracellular 62.35 19.92
TraesCS1D01G193400.1 Wheat cytosol 55.29 16.21
TraesCS1A01G113000.1 Wheat cytosol 52.94 15.52
TraesCS1B01G412900.1 Wheat cytosol 51.76 15.28
TraesCSU01G147900.1 Wheat cytosol 51.76 15.28
TraesCS3A01G383800.1 Wheat cytosol 50.59 14.93
TraesCS2D01G492000.1 Wheat mitochondrion, peroxisome 9.41 3.48
PGSC0003DMT400021839 Potato cytosol 3.53 1.08
Solyc08g045710.1.1 Tomato nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400035968EnsemblPlantsGene:PGSC0003DMG400013849Gene3D:3.40.50.12240GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005524InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bdInterPro:P-loop_NTPaseKEGG:00190+3.6.3.14KEGG:00195+3.6.3.14PANTHER:PTHR43089
PANTHER:PTHR43089:SF5PFAM:PF00006PGSC:PGSC0003DMG400013849SUPFAM:SSF52540UniParc:UPI000296C807UniProt:M1B325
MapMan:35.1:::::
Description
ATP synthase subunit alpha, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400013849]
Coordinates
chr7:-:27637794..27638359
Molecular Weight (calculated)
9441.3 Da
IEP (calculated)
7.684
GRAVY (calculated)
-0.264
Length
85 amino acids
Sequence
(BLAST)
1: MGEYFRDNGM HALIIYDDLS KQAVAYRQMS LLLRRPPGRE AFPGDVFYLH SRLLERAAKR SDQTGAGSLT ALPVIETQAG DVSLS
Best Arabidopsis Sequence Match ( ATMG01190.1 )
(BLAST)
001: MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP
101: AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE
201: TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD
301: VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY
401: REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA IPNSVKPELL QALKGGLTNE RKMEPDAFLK
501: ERALALI
Arabidopsis Description
ATP1ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G1C2Z0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.