Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G424200.1 | Wheat | cytosol | 97.37 | 97.37 |
| TraesCS2A01G426100.1 | Wheat | cytosol | 84.59 | 95.34 |
| TraesCS3B01G441400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.97 | 61.96 |
| HORVU2Hr1G099580.8 | Barley | nucleus | 76.32 | 59.71 |
| TraesCS4B01G049700.1 | Wheat | cytosol | 59.4 | 59.18 |
| TraesCS6B01G357900.1 | Wheat | cytosol | 58.27 | 58.27 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G446400.1 | EnsemblPlantsGene:TraesCS2B01G446400 | Gene3D:1.25.40.990 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005838 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0019538 | InterPro:26S_Psome_Rpn12 |
| InterPro:CSN8_PSD8_EIF3K | InterPro:IPR000717 | InterPro:PCI_dom | PANTHER:PTHR12387 | PFAM:PF10075 | PFscan:PS50250 |
| MapMan:19.2.6.2.2.11 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:639215124..639218311
Molecular Weight (calculated)
31029.4 Da
IEP (calculated)
4.908
GRAVY (calculated)
-0.238
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRELEEANC KFAWLKLACA EDELDSCATL LSELKVLLTK FPSMPPSFER TPNAVAELRL ARAIYEFAVI FSIKVKDQDA FERNFFQLKV FYMDTRGILP
101: PSPEEYRILG LNLMRLLAEN RVAEFHTELE LLPPRALDHP CIKYAVELEQ SFMEGTYNRL TDGRQAVPHE TYLYFMDLLA ETVRDEIADC SGQAYDHLPV
201: DDTRKMLMFS SEQKLLEYIS EIQHEWEVQN HSVLFHMAKV QPRVGIQAHQ MIKRSLCYAR ELERIV
101: PSPEEYRILG LNLMRLLAEN RVAEFHTELE LLPPRALDHP CIKYAVELEQ SFMEGTYNRL TDGRQAVPHE TYLYFMDLLA ETVRDEIADC SGQAYDHLPV
201: DDTRKMLMFS SEQKLLEYIS EIQHEWEVQN HSVLFHMAKV QPRVGIQAHQ MIKRSLCYAR ELERIV
001: MDPQLTEVSQ QFERFKAAFA RKDYNTCSDL LSQLKVLLTK FTSLPPLFEN SPNAAKELTI ARDIYEHAVV LSVKTEDQDA FERDFFQLKP YYVDARNRIP
101: QSPQENLILG LNLLRLLVQN RIAEFHTELE LLSSATLEDP CIKHAVELEQ SFMEGAYNRV LSARQTAPDA TYVYFMDLLA KTIRDEIAGC SEKAYDYVSI
201: SDARQMLLFS SDQELLTYVT DEHPEWEVKE GFVVFQKAKE TAPCKEIPSL QLINQTLSYA RELERIV
101: QSPQENLILG LNLLRLLVQN RIAEFHTELE LLSSATLEDP CIKHAVELEQ SFMEGAYNRV LSARQTAPDA TYVYFMDLLA KTIRDEIAGC SEKAYDYVSI
201: SDARQMLLFS SDQELLTYVT DEHPEWEVKE GFVVFQKAKE TAPCKEIPSL QLINQTLSYA RELERIV
Arabidopsis Description
RPN12ARPN12a [Source:UniProtKB/TrEMBL;Acc:A0A178WH62]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.