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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G215500.1 Wheat nucleus 98.26 98.26
HORVU2Hr1G041890.1 Barley nucleus 36.96 62.5
OQU93282 Sorghum cytosol 52.17 46.51
Os06t0248200-01 Rice cytosol 32.17 45.12
TraesCS7D01G417300.1 Wheat plastid 42.61 42.98
TraesCS4D01G091300.1 Wheat nucleus 34.78 16.33
Protein Annotations
EnsemblPlants:TraesCS2D01G215900.1EnsemblPlantsGene:TraesCS2D01G215900Gene3D:3.30.70.330GO:GO:0003674GO:GO:0003676GO:GO:0005488
InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfInterPro:RBD_domain_sfInterPro:RRM_domPANTHER:PTHR23139
PANTHER:PTHR23139:SF76PFAM:PF00076PFscan:PS50102SEG:segSMART:SM00360SUPFAM:SSF54928
MapMan:35.1:::::
Description
No Description!
Coordinates
chr2D:-:178776692..178777384
Molecular Weight (calculated)
24686.4 Da
IEP (calculated)
7.445
GRAVY (calculated)
-0.337
Length
230 amino acids
Sequence
(BLAST)
001: MDSIAAAAGN CRCSRVVYVG NIPFKAEEKE VRDACELIGP ALSFNLAADA DTGKRKGYAF VEYADDATAQ SACRNMHGHR LLDRELRVGL AERAGAARRR
101: RRGDHEPVGM EDAIHAASLV NDRGRLAVVS SVTRHLAGAS RHELREALDT FKNCGPENCK VLTEYVPGLD IAMEMVQRLL DMAAADDAAG EAKRKKRASA
201: CPPPDDHGAK LMKLEDGGKA TPVFAGVACV
Best Arabidopsis Sequence Match ( AT1G71800.1 )
(BLAST)
001: MASSSSQRRC VFVGNIPYDA TEEQLREICG EVGPVVSFRL VTDRETGKPK GYGFCEYKDE ETALSARRNL QSYEINGRQL RVDFAENDKG TDKTRDQSQG
101: GPGLPSTTTV TESQKQIGGP VDSNMHQPVG LHLATTAASV IAGALGGPQV GSQFTQSNLQ VPASDPLALH LAKMSRSQLT EIISSIKLMA TQNKEHARQL
201: LVSRPQLLKA VFLAQVMLGI VSPQVLQSPN IVQAPSHMTG SSIQDAQLSG QNLLPPLAQR SQQLSRAPHS QYPVQQSSKQ PFSQIPQLVA QPGPSSVNPP
301: PRSQVKVENA PFQRQQVVPA STNIGYSSQN SVPNNAIQPS QVPHQALPNS VMQQGGQTVS LNFGKRINEG PPHQSMNRPS KMMKVEDRRT TSLPGGHVSN
401: SMLPNQAQAP QTHISPDVQS TLLQQVMNLT PEQLRLLTPE QQQEVLKLQQ ALKQDHMMQP S
Arabidopsis Description
CSTF64Cleavage stimulating factor 64 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9G6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.