Factsheet for TraesCS3B01G554500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G490200.1	Wheat	cytosol	25.19	78.94
TraesCS7B01G491500.1	Wheat	cytosol	8.14	78.23
TraesCS7B01G491400.1	Wheat	endoplasmic reticulum	40.55	77.22
TraesCS7B01G491100.2	Wheat	cytosol, endoplasmic reticulum	36.02	75.74
TraesCS7A01G566900.1	Wheat	cytosol	10.83	75.37
TraesCS7B01G490100.1	Wheat	cytosol	13.52	74.9
TraesCS7B01G491200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.02	73.78
TraesCS7B01G491000.1	Wheat	cytosol	19.18	73.64
TraesCS7B01G492000.1	Wheat	cytosol	57.04	73.61
TraesCS7B01G491800.1	Wheat	cytosol	13.8	73.31
TraesCS2B01G599700.1	Wheat	cytosol	38.43	72.89
TraesCS1B01G348600.2	Wheat	cytosol	73.11	71.64
TraesCS7B01G489900.1	Wheat	cytosol, endoplasmic reticulum	71.69	71.39
TraesCS7B01G491600.2	Wheat	cytosol	71.41	70.61
TraesCS7D01G525700.1	Wheat	mitochondrion, plastid	57.47	69.7
TraesCS7B01G380900.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	23.85	69.2
TraesCS4B01G004600.1	Wheat	cytosol	7.22	68.0
TraesCS7B01G491300.1	Wheat	cytosol	9.55	67.5
TraesCS6B01G070800.1	Wheat	cytosol	9.98	66.82
TraesCS7B01G380700.1	Wheat	extracellular	13.3	65.05
TraesCS6B01G070300.1	Wheat	cytosol	27.25	59.32
TraesCS6B01G069700.2	Wheat	cytosol	23.99	59.16
TraesCS6B01G070200.1	Wheat	cytosol	38.22	59.15
TraesCS6B01G070900.1	Wheat	cytosol	56.97	56.22
OQU82964	Sorghum	cytosol	35.46	55.92
KXG27846	Sorghum	cytosol	41.47	55.7
TraesCS6B01G069500.1	Wheat	cytosol	55.91	55.59
Zm00001d024396_P001	Maize	plastid	41.54	54.71
TraesCS6B01G069400.2	Wheat	cytosol	55.84	54.64
TraesCS6B01G069900.2	Wheat	cytosol	55.84	54.38
TraesCS6B01G070500.2	Wheat	cytosol	54.42	54.0
TraesCS6B01G070400.1	Wheat	cytosol	55.7	53.54
EES08064	Sorghum	cytosol	38.5	53.28
KXG27844	Sorghum	cytosol	43.17	53.23
TraesCS4B01G004900.1	Wheat	cytosol	14.93	53.15
KXG27854	Sorghum	cytosol	38.43	53.08
KXG27853	Sorghum	cytosol	42.96	52.87
TraesCS1B01G397100.1	Wheat	cytosol	10.76	52.78
OQU82958	Sorghum	cytosol	42.68	52.62
TraesCS1B01G397000.1	Wheat	peroxisome	16.77	52.43
TraesCS6B01G070700.1	Wheat	cytosol	41.4	52.42
KXG27860	Sorghum	cytosol	38.36	52.27
TraesCS2B01G523900.1	Wheat	cytosol	38.92	51.45
TraesCS4B01G004800.1	Wheat	cytosol	35.88	50.95
TraesCS3B01G039200.1	Wheat	mitochondrion, plasma membrane, plastid	40.27	49.96
TraesCS4B01G005100.1	Wheat	cytosol	37.72	49.91
TraesCS4B01G005000.1	Wheat	cytosol, mitochondrion	27.95	48.65
TraesCS6B01G070000.1	Wheat	cytosol	15.07	47.54
TraesCS3B01G590700.1	Wheat	extracellular	10.62	39.58
TraesCS3B01G590800.1	Wheat	plasma membrane	29.79	39.09
TraesCS3B01G590600.1	Wheat	endoplasmic reticulum, plasma membrane	29.72	39.0
TraesCS5B01G422400.1	Wheat	cytosol	44.37	33.42
TraesCS3B01G081400.1	Wheat	cytosol	10.19	31.44
TraesCS3B01G081300.1	Wheat	cytosol	10.54	31.43
TraesCS3B01G088100.1	Wheat	cytosol	12.46	31.15
TraesCS5B01G291600.1	Wheat	cytosol, extracellular	22.36	30.95
TraesCS4B01G365400.1	Wheat	cytosol	17.83	30.58
TraesCS3B01G081900.1	Wheat	cytosol	14.3	30.51
TraesCS3B01G082800.2	Wheat	cytosol	22.08	30.5
TraesCS3B01G082400.1	Wheat	cytosol	21.44	30.27
TraesCS3B01G081600.1	Wheat	cytosol	21.73	30.22
TraesCS3B01G081700.1	Wheat	cytosol	21.37	29.87
TraesCS3B01G088000.1	Wheat	cytosol	20.88	29.86
TraesCS3B01G083600.1	Wheat	cytosol	21.02	29.85
TraesCS1B01G169700.1	Wheat	cytosol	19.67	29.83
TraesCS3B01G083500.1	Wheat	cytosol	21.44	29.82
TraesCS3B01G081500.2	Wheat	cytosol	21.44	29.76
TraesCS3B01G083800.1	Wheat	cytosol	14.51	29.75
TraesCS3B01G088200.1	Wheat	cytosol	20.74	29.66
TraesCS3B01G083700.1	Wheat	cytosol	11.32	29.25
TraesCS3B01G485300.1	Wheat	cytosol	20.03	28.82
TraesCS3B01G485200.1	Wheat	cytosol	20.03	28.82
TraesCS2B01G607700.1	Wheat	cytosol	20.45	28.61
TraesCS7B01G482300.1	Wheat	cytosol, plastid	21.94	28.34
TraesCS3B01G082500.1	Wheat	cytosol	10.97	28.34
TraesCS3B01G082200.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	18.83	27.8
TraesCS3B01G082000.1	Wheat	cytosol	5.31	26.69
TraesCS7B01G491900.1	Wheat	mitochondrion	3.75	26.37
TraesCS3B01G082900.1	Wheat	cytosol	4.88	25.18
TraesCS5B01G179100.1	Wheat	plastid	19.25	25.09
TraesCS5B01G178900.1	Wheat	cytosol	17.27	25.08

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:HARBI1_dom	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13359	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF872
InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3B01G554500	EnsemblPlants:TraesCS3B01G554500.1	TIGR:cd14798
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:788253198..788258692

Molecular Weight (calculated)

159039.0 Da

IEP (calculated)

6.343

GRAVY (calculated)

-0.138

Length

1413 amino acids

Sequence
(BLAST)

0001: MAMVLDAFAS YLGHMLTHVA ANKAGTMLGV SGEIDKMGSK LLDLKNFLAD ADQRNITDTT VQEWVGQLKR AMYEATDILD LCQLKAMERG PSAVNAGCFN
0101: PLLFCMRNPI LAHEIGIRIK ALNRRLDSIK ERGASFNFIN LRYYEDHSSN AHSSLHGNPN RETAGDFDRA AMVGEKIEED ARALVVQIMQ TRKEVNNDIR
0201: VVAIVGVGGI GKTTLAQKVF NDDAIQGEFS KRIWLSINQN FTEVELLRRA IIEAEGDSQS AGNAKATLHQ NLKDSIIGHK TLLVMDDVWD HGAWEGVLRI
0301: PFINAAASGS RVLITTRDEG VARGMAARWP YHHIDTLLLE DAWSLLKKQV LSSEIDEDHI NTLKDVGLKI IQKCGGLPLA IKVMGGLLRE RGGLRRDWEH
0401: VLDDSKWSIT KMPQELNYAV YLSYEYMPSY LKQCFLFYSI LPKSKFFTLN QVVAMWISEG FIHGNSSDLE ELGRSYYKEL VSRNLIEPDK SYIGLMVCSM
0501: HDVVRSFAQY MTKDEALVAH DGENDILTGL SSQKFLRLSI EANQSQSGEL DWKSLRAQQS VRTLILTIQI KMNPGDSLVT FSSLRILYIH SVGVAALVES
0601: LHQLKHLRYL ALLNTDISVL PENIGKMKLL QYFDLIGCKN LVNLPNSIVK LSQLRLLILP TSSIVPRGFS GLTNMRRLSG FRAHMDSDSC NLDELGPLSQ
0701: LRFLTLHELE NVSAALFAAN AKLGEKKHLI DIALNCTSKL GNDGLVEEKE GVSEEEQRRI VNVFNELCPP PSVENLEIEG YFGQKLPSWI MSTSTVLLGN
0801: LRTLLFADLA CCTQLPNGLC QLPNLQLLQV RRAPCIKRVG TRFLQAAATP FPRLNKLTLG GMVQWEEWEW EEQVQAMPRL EKLTLITCKL MRVPPGLASN
0901: ARALKVLSFN NVQQLCCLEN FPFVVELTVS GSSDLERITD LPNMQKLIIS SCPKLKVLER IPKLERLVLE DYIMEQLPGY MQDINPRHLL LHCRIWLLSA
1001: LAVGQSGLEW DKFSHVEHVK AYARDRDNQR KWYLFYTRRD NFKLDSNTSC YTIFEETLSS CMVDAQGFET VYKMRRSTFN HVCRLVRVSF FEDMMTRGHT
1101: FTFVDGRVLC LQDCVAVALR MLNSGEPQEV IGSSVGVNES TVSLVTQMFV DAMWKQEIHN VLWPRYAEME KIKHKFDKIH GLPNCCGVVH TAHITFGSLN
1201: HEPGDGEYDD MLMLVVDPDM RFIDTDLGSQ NQLSVLHDSW LFKSCQEGTT LNGSKLKVSD CLDVGEYIIG DAGYPLLPWL LTPYPLEDKD LSADFPLYQA
1301: EFNRRHSAAS TLALVAVARL KDTWKILDRA VSSGPNLRPT YVCCMLHNIV IDMEKAEQGV EEGVGMEEKV RQLADEDAAR TRDVLAKHLI ESREEEKEAA
1401: VVVASSSGDQ NKG

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.