Factsheet for TraesCS6B01G070400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G070900.1	Wheat	cytosol	78.91	81.01
TraesCS6B01G069700.2	Wheat	cytosol	31.43	80.63
TraesCS6B01G070200.1	Wheat	cytosol	50.0	80.5
TraesCS6B01G069900.2	Wheat	cytosol	76.73	77.74
TraesCS6B01G070800.1	Wheat	cytosol	11.16	77.73
TraesCS6B01G070300.1	Wheat	cytosol	33.95	76.89
TraesCS6B01G070500.2	Wheat	cytosol	72.86	75.21
TraesCS6B01G070700.1	Wheat	cytosol	57.01	75.09
TraesCS6B01G069500.1	Wheat	cytosol	70.88	73.33
TraesCS6B01G069400.2	Wheat	cytosol	70.41	71.68
TraesCS6B01G070000.1	Wheat	cytosol	20.95	68.75
TraesCS7B01G491500.1	Wheat	cytosol	6.67	66.67
TraesCS7B01G490100.1	Wheat	cytosol	11.02	63.53
TraesCS4B01G004600.1	Wheat	cytosol	6.46	63.33
TraesCS7B01G491000.1	Wheat	cytosol	15.65	62.5
TraesCS7B01G491800.1	Wheat	cytosol	11.22	62.03
TraesCS7B01G491400.1	Wheat	endoplasmic reticulum	29.93	59.3
TraesCS7B01G491100.2	Wheat	cytosol, endoplasmic reticulum	27.07	59.23
TraesCS1B01G397000.1	Wheat	peroxisome	18.16	59.07
TraesCS7B01G489900.1	Wheat	cytosol, endoplasmic reticulum	55.71	57.72
TraesCS7B01G491200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.06	57.65
OQU82964	Sorghum	cytosol	34.97	57.37
TraesCS1B01G348600.2	Wheat	cytosol	56.12	57.21
TraesCS7B01G491300.1	Wheat	cytosol	7.76	57.0
TraesCS7B01G492000.1	Wheat	cytosol	42.31	56.8
TraesCS7B01G490200.1	Wheat	cytosol	17.41	56.76
Zm00001d024396_P001	Maize	plastid	41.22	56.48
KXG27846	Sorghum	cytosol	40.2	56.18
TraesCS7B01G491600.2	Wheat	cytosol	54.42	55.98
TraesCS3B01G554500.1	Wheat	cytosol	53.54	55.7
TraesCS1B01G397100.1	Wheat	cytosol	10.88	55.56
TraesCS2B01G599700.1	Wheat	cytosol	28.1	55.44
EES08064	Sorghum	cytosol	38.23	55.04
KXG27854	Sorghum	cytosol	38.23	54.94
TraesCS4B01G004900.1	Wheat	cytosol	14.76	54.66
KXG27844	Sorghum	cytosol	42.31	54.28
TraesCS2B01G523900.1	Wheat	cytosol	39.46	54.26
KXG27860	Sorghum	cytosol	38.03	53.91
OQU82958	Sorghum	cytosol	41.7	53.49
TraesCS4B01G004800.1	Wheat	cytosol	36.12	53.37
TraesCS7B01G380700.1	Wheat	extracellular	10.48	53.29
TraesCS4B01G005000.1	Wheat	cytosol, mitochondrion	29.25	52.96
KXG27853	Sorghum	cytosol	41.29	52.87
TraesCS3B01G039200.1	Wheat	mitochondrion, plasma membrane, plastid	40.82	52.68
TraesCS4B01G005100.1	Wheat	cytosol	37.89	52.15
TraesCS7B01G380900.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	17.21	51.95
TraesCS3B01G590700.1	Wheat	extracellular	10.41	40.37
TraesCS3B01G590800.1	Wheat	plasma membrane	28.64	39.09
TraesCS3B01G590600.1	Wheat	endoplasmic reticulum, plasma membrane	28.5	38.9
TraesCS5B01G422400.1	Wheat	cytosol	45.51	35.66
TraesCS3B01G081400.1	Wheat	cytosol	10.27	32.97
TraesCS4B01G365400.1	Wheat	cytosol	18.23	32.52
TraesCS3B01G081300.1	Wheat	cytosol	10.27	31.86
TraesCS3B01G081900.1	Wheat	cytosol	14.01	31.12
TraesCS3B01G081600.1	Wheat	cytosol	21.5	31.1
TraesCS3B01G083500.1	Wheat	cytosol	21.5	31.1
TraesCS5B01G291600.1	Wheat	cytosol, extracellular	21.56	31.05
TraesCS3B01G081700.1	Wheat	cytosol	21.16	30.76
TraesCS3B01G082400.1	Wheat	cytosol	20.88	30.67
TraesCS3B01G082800.2	Wheat	cytosol	21.22	30.5
TraesCS7B01G482300.1	Wheat	cytosol, plastid	22.65	30.44
TraesCS2B01G607700.1	Wheat	cytosol	20.88	30.4
TraesCS3B01G081500.2	Wheat	cytosol	21.02	30.35
TraesCS3B01G083700.1	Wheat	cytosol	11.29	30.35
TraesCS3B01G083800.1	Wheat	cytosol	14.22	30.33
TraesCS3B01G088100.1	Wheat	cytosol	11.63	30.27
TraesCS7B01G491900.1	Wheat	mitochondrion	4.08	29.85
TraesCS3B01G083600.1	Wheat	cytosol	20.14	29.75
TraesCS1B01G169700.1	Wheat	cytosol	18.71	29.51
TraesCS3B01G082500.1	Wheat	cytosol	10.88	29.25
TraesCS3B01G088000.1	Wheat	cytosol	19.39	28.85
TraesCS3B01G088200.1	Wheat	cytosol	19.32	28.74
TraesCS3B01G485200.1	Wheat	cytosol	19.05	28.51
TraesCS3B01G485300.1	Wheat	cytosol	19.05	28.51
TraesCS3B01G082200.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	17.76	27.27
TraesCS3B01G082000.1	Wheat	cytosol	5.17	27.05
TraesCS5B01G178900.1	Wheat	cytosol	16.87	25.49
TraesCS3B01G082900.1	Wheat	cytosol	4.63	24.82
TraesCS5B01G179100.1	Wheat	plastid	18.03	24.45

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:HARBI1_dom	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13359	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF872
InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS6B01G070400	EnsemblPlants:TraesCS6B01G070400.1	TIGR:cd14798
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:47088397..47096625

Molecular Weight (calculated)

165650.0 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.178

Length

1470 amino acids

Sequence
(BLAST)

0001: MVLDAFASYV LHMLTEMASK EVHMLLGFRR EIDTMDIKLR DLKNFLADSD RRNITDKSVQ EWVAQLKRAM YEATDILDLC QLKAMERGMC TADVGCFNPL
0101: LFCMRNPSYV HDIGTRIKAL NKRLDIIKER SAAFSFIPLG SYEDRRSKVH GSHSMNKRRE TSGEFDRSGV VGEKIEQDTR KLVEIMLSEK EGNTNIMVVA
0201: VVGVGGIGKT TLAQKVFNDE ALNAEFEKTI WLSINKDFNK VELLKTIITQ AGGVHGGDQA LAVLQPILAT TLKGKKLFLV LDDVWNHEAW DDVLKTPLAN
0301: VVAPGSRVLV TTRDETIARR MKAVTPHHHV DKLDEEDAWS LLKKQLISTE IDDRDIDMLK DIGVQILAKC DGLPLAVKVM GGLLCQKDKK HHEWEKVLAD
0401: SIWSISGLPE ELNHAVYLSY EDLSSCAKQC FLHYSLLPKT ASFVKSEIIA MWISEGFLHE TSNDLEELGS MYYKELILRN LIEPNTKYAD QGVCNMHDVV
0501: CSFAQFVARD EALAAHSGET NIVSKLGAHE FVRLSLESKA SESDGLGWGT LQAKRALRVL ILVGNINIKP GDSLVHFPCL RTLHIDSAHV AALLESLHEL
0601: KHLRYLSLKN TDMPSLPDSI GKMKFLQYIN LRGCRQLVKL PGSIVKLGQL RYLNFSRTNI DGTPRGFCVL TNLRILYGFP AQQDGDWCSL EELGPLSQLK
0701: HLELDGLENI TASSSAAKAK LADKVHLTIL FLNCGSILGD DGLIKEEDCV SEEAQQQIEK LFDELCPPSR LETLYIRGYF GQRLPRWMIS SLDVPLKNLR
0801: ILFIADLAYC TQLPIGLCQL PYLELIQINR APAIKLVGPD FLQSYHHHSP RPSQMLPAFP RLHEMNLIGM VEWEEWEWEE QVHAFPVLQQ LMLARCKLKC
0901: LPPGLAYQAR ALNKLIIYYV QGLISVENFP SLVELKLAIN LDVKRISNLP RLQKLTIQDC PKLKALEDVP ALQRLILTKK DMETLPEYMG SINPSHLELY
1001: CSLALLASIA TGQSGPEWDK FRHVEHVKAY ACEGDNSRKW YVLYTANPYS LETNVNLCAF MSRGTLTSFE DTQRFESVFK MTRKTFSYIC SLVYVPSLED
1101: MNNYTFDDGR LLSLKDRVAI ALKRLYSSEP PEIIGSSVSV SESTVLLVSE RFVDAVYKRA KNHGCWPDSS KMDNIKSMFD KIHNMHNCCG VICTTHIPFG
1201: PNWDCEKNDS ILVQLVIDPE MRFRNIWWGP VSSMNQSSIL HESNLFNECE EGGYLNGSKL KVALDGSEVG EYIIGDAGFP LLPWLLTPYQ EEDLLDSKAE
1301: FNRRHNAATN CALKALARFK HTWKYLQGET SCLVNPDTLV ETIYACCYLH NIVIDMEDDG AMPSPKRRNR SKEVRQLANE DAVRARDMLS QYFLTSMSSE
1401: SGVGLADLEV AATGSGDEGK EQKAQTRASK EERRDGGREA LIVLLEWSIF KAWMPSCPGN GAKQHFVAAA

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.