Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G082900.1 | Wheat | cytosol | 32.93 | 79.56 |
| TraesCS3B01G083700.1 | Wheat | cytosol | 64.5 | 78.06 |
| TraesCS3B01G082000.1 | Wheat | cytosol | 32.48 | 76.51 |
| TraesCS3B01G082500.1 | Wheat | cytosol | 62.84 | 76.05 |
| TraesCS3B01G081400.1 | Wheat | cytosol | 50.0 | 72.27 |
| TraesCS3B01G083500.1 | Wheat | cytosol | 94.26 | 61.42 |
| TraesCS3D01G068800.1 | Wheat | cytosol | 91.24 | 61.32 |
| HORVU3Hr1G012860.1 | Barley | cytosol | 85.65 | 58.15 |
| TraesCS3A01G069800.2 | Wheat | cytosol | 81.87 | 58.03 |
| Os11t0676800-00 | Rice | cytosol | 53.47 | 55.31 |
| TraesCS3B01G081300.1 | Wheat | cytosol | 37.92 | 52.95 |
| TraesCS3B01G082400.1 | Wheat | cytosol | 77.64 | 51.35 |
| TraesCS3B01G081600.1 | Wheat | cytosol | 78.4 | 51.08 |
| TraesCS3B01G083600.1 | Wheat | cytosol | 75.83 | 50.45 |
| TraesCS3B01G081700.1 | Wheat | cytosol | 75.08 | 49.16 |
| TraesCS3B01G082800.2 | Wheat | cytosol | 75.68 | 48.97 |
| TraesCS3B01G081500.2 | Wheat | cytosol | 75.23 | 48.92 |
| TraesCS2B01G607700.1 | Wheat | cytosol | 73.72 | 48.32 |
| TraesCS3B01G082200.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 63.29 | 43.78 |
| TraesCS4B01G365400.1 | Wheat | cytosol | 50.0 | 40.17 |
| KXG29105 | Sorghum | cytosol | 57.25 | 37.19 |
| TraesCS3B01G083800.1 | Wheat | cytosol | 37.46 | 35.99 |
| TraesCS5B01G291600.1 | Wheat | cytosol, extracellular | 53.02 | 34.38 |
| Os11t0673900-00 | Rice | cytosol, plasma membrane | 42.6 | 33.85 |
| TraesCS3B01G088100.1 | Wheat | cytosol | 28.25 | 33.1 |
| TraesCS7B01G491100.2 | Wheat | cytosol, endoplasmic reticulum | 29.91 | 29.46 |
| TraesCS6B01G069700.2 | Wheat | cytosol | 25.08 | 28.97 |
| TraesCS6B01G070300.1 | Wheat | cytosol | 28.4 | 28.97 |
| TraesCS7B01G490200.1 | Wheat | cytosol | 19.64 | 28.82 |
| TraesCS7B01G491400.1 | Wheat | endoplasmic reticulum | 31.57 | 28.17 |
| TraesCS3B01G590700.1 | Wheat | extracellular | 15.86 | 27.7 |
| TraesCS4B01G004900.1 | Wheat | cytosol | 16.47 | 27.46 |
| TraesCS7B01G491000.1 | Wheat | cytosol | 14.95 | 26.9 |
| GSMUA_Achr2P11320_001 | Banana | cytosol | 41.24 | 26.79 |
| TraesCS7B01G490100.1 | Wheat | cytosol | 10.27 | 26.67 |
| TraesCS7B01G491800.1 | Wheat | cytosol | 10.57 | 26.32 |
| TraesCS1B01G397000.1 | Wheat | peroxisome | 17.67 | 25.89 |
| TraesCS1B01G397100.1 | Wheat | cytosol | 11.03 | 25.35 |
| TraesCS6B01G070800.1 | Wheat | cytosol | 8.01 | 25.12 |
| TraesCS7B01G491200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.97 | 24.32 |
| TraesCS7B01G380900.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 17.82 | 24.23 |
| GSMUA_Achr1P14020_001 | Banana | cytosol | 37.31 | 23.96 |
| GSMUA_Achr1P14030_001 | Banana | cytosol | 38.07 | 23.89 |
| TraesCS7B01G491500.1 | Wheat | cytosol | 5.29 | 23.81 |
| TraesCS6B01G070200.1 | Wheat | cytosol | 32.33 | 23.44 |
| TraesCS3B01G088200.1 | Wheat | cytosol | 34.89 | 23.38 |
| TraesCS3B01G485200.1 | Wheat | cytosol | 33.84 | 22.81 |
| TraesCS3B01G485300.1 | Wheat | cytosol | 33.84 | 22.81 |
| TraesCS1B01G169700.1 | Wheat | cytosol | 32.02 | 22.75 |
| TraesCS3B01G088000.1 | Wheat | cytosol | 33.69 | 22.57 |
| PGSC0003DMT400079012 | Potato | cytosol | 5.29 | 22.29 |
| TraesCS7B01G482300.1 | Wheat | cytosol, plastid | 35.05 | 21.21 |
| TraesCS4B01G004600.1 | Wheat | cytosol | 4.68 | 20.67 |
| AT3G50950.1 | Thale cress | cytosol | 26.43 | 20.54 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 26.13 | 20.35 |
| TraesCS3B01G590600.1 | Wheat | endoplasmic reticulum, plasma membrane | 33.08 | 20.33 |
| TraesCS3B01G590800.1 | Wheat | plasma membrane | 32.78 | 20.15 |
| PGSC0003DMT400009065 | Potato | cytosol | 25.23 | 19.69 |
| PGSC0003DMT400067354 | Potato | cytosol | 25.98 | 19.66 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 25.23 | 19.65 |
| Solyc07g053020.1.1 | Tomato | cytosol | 24.92 | 19.37 |
| Solyc07g053010.1.1 | Tomato | cytosol | 25.38 | 19.11 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 25.38 | 19.03 |
| TraesCS7B01G492000.1 | Wheat | cytosol | 30.21 | 18.26 |
| TraesCS2B01G523900.1 | Wheat | cytosol | 29.31 | 18.15 |
| TraesCS3B01G039200.1 | Wheat | mitochondrion, plasma membrane, plastid | 30.97 | 18.0 |
| TraesCS2B01G599700.1 | Wheat | cytosol | 20.24 | 17.99 |
| TraesCS4B01G005100.1 | Wheat | cytosol | 28.85 | 17.88 |
| TraesCS4B01G004800.1 | Wheat | cytosol | 26.59 | 17.69 |
| TraesCS5B01G178900.1 | Wheat | cytosol | 24.92 | 16.96 |
| TraesCS7B01G491900.1 | Wheat | mitochondrion | 5.14 | 16.92 |
| TraesCS5B01G179100.1 | Wheat | plastid | 26.74 | 16.33 |
| TraesCS6B01G070900.1 | Wheat | cytosol | 31.42 | 14.53 |
| TraesCS6B01G069900.2 | Wheat | cytosol | 31.57 | 14.4 |
| TraesCS6B01G070500.2 | Wheat | cytosol | 30.97 | 14.4 |
| TraesCS6B01G069400.2 | Wheat | cytosol | 31.27 | 14.34 |
| TraesCS3B01G554500.1 | Wheat | cytosol | 30.51 | 14.3 |
| TraesCS7B01G491600.2 | Wheat | cytosol | 30.82 | 14.28 |
| TraesCS1B01G348600.2 | Wheat | cytosol | 30.82 | 14.15 |
| TraesCS4B01G005000.1 | Wheat | cytosol, mitochondrion | 17.22 | 14.04 |
| TraesCS6B01G070400.1 | Wheat | cytosol | 31.12 | 14.01 |
| TraesCS6B01G069500.1 | Wheat | cytosol | 29.91 | 13.93 |
| TraesCS7B01G489900.1 | Wheat | cytosol, endoplasmic reticulum | 29.31 | 13.67 |
| CDX73766 | Canola | plastid | 26.13 | 13.4 |
| Bra036845.1-P | Field mustard | plastid | 25.98 | 13.32 |
| TraesCS5B01G422400.1 | Wheat | cytosol | 28.25 | 9.97 |
| TraesCS6B01G070700.1 | Wheat | cytosol | 16.77 | 9.95 |
| TraesCS7B01G380700.1 | Wheat | extracellular | 0.0 | 0.0 |
| TraesCS7B01G491300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS6B01G070000.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G081900.1 | EnsemblPlantsGene:TraesCS3B01G081900 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | PANTHER:PTHR44518 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | TIGR:cd00009 | TIGR:cd14798 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:+:51857103..51861171
Molecular Weight (calculated)
74440.6 Da
IEP (calculated)
8.419
GRAVY (calculated)
-0.094
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAILESLLG SCANKLQNII SDEAILILGV EEELAEVLRR VELIRCCIYD AEKWRTKELA VNNWLGQLRD VIYDVDEILD VARCKGSKLL LDNPSSSSRS
101: ASYKGLSVSS CFCNIGSRHD VAVRIKSLNK RIEKISKDTT FLTFSSSTQP TGNGPTSKVI RSSNLVEPNL VGKEIIHSSK KLVDLALAHK GNKSYKLAIV
201: GTGGVGKTTL AQKIFNDKKI KGSFKLQAWI CVSQDYNQVT VLKEVLRNIG VYHEQGETIA ELQRKLAETV EGKSFFLVLD DVWHPNVWAD LLRTPFHTTN
301: SGVILVTTRD DQIAMRIGIQ HTHQVDLMSA EVGWELLWKS MNIAEEKEVH NLRNTGMEIV DKCGRLPLAI KVTASALASK DLTENEWRKF LGKYSGSHGM
401: LSDEIEGALY LSYDELPHRL KQCFLYCALY TEDSIIYRGV VTKLWIAEGF IMEQQGQLLE DTAEGYYYEL IHRNLLQPDN TIFNQAQCRT HDLLRQLACK
501: LSQDECFIGD VETLRGENMS KLRRLSVVSK KDKLVLTSMD NMVVKVRTFL AFYGPWKIED AFFKRFLLLR VLALNYSIVR NIPDSIAKLI HLRLLDLGHT
601: GISHLPESIG SLKNLQVLSL INCDALHSLP SGMTQLCNLR CLRLTGTKVN KVPKGIGKLN LL
101: ASYKGLSVSS CFCNIGSRHD VAVRIKSLNK RIEKISKDTT FLTFSSSTQP TGNGPTSKVI RSSNLVEPNL VGKEIIHSSK KLVDLALAHK GNKSYKLAIV
201: GTGGVGKTTL AQKIFNDKKI KGSFKLQAWI CVSQDYNQVT VLKEVLRNIG VYHEQGETIA ELQRKLAETV EGKSFFLVLD DVWHPNVWAD LLRTPFHTTN
301: SGVILVTTRD DQIAMRIGIQ HTHQVDLMSA EVGWELLWKS MNIAEEKEVH NLRNTGMEIV DKCGRLPLAI KVTASALASK DLTENEWRKF LGKYSGSHGM
401: LSDEIEGALY LSYDELPHRL KQCFLYCALY TEDSIIYRGV VTKLWIAEGF IMEQQGQLLE DTAEGYYYEL IHRNLLQPDN TIFNQAQCRT HDLLRQLACK
501: LSQDECFIGD VETLRGENMS KLRRLSVVSK KDKLVLTSMD NMVVKVRTFL AFYGPWKIED AFFKRFLLLR VLALNYSIVR NIPDSIAKLI HLRLLDLGHT
601: GISHLPESIG SLKNLQVLSL INCDALHSLP SGMTQLCNLR CLRLTGTKVN KVPKGIGKLN LL
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.