Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G068800.1 | Wheat | cytosol | 88.31 | 87.41 |
| TraesCS3B01G083500.1 | Wheat | cytosol | 89.95 | 86.32 |
| TraesCS3B01G081900.1 | Wheat | cytosol | 58.15 | 85.65 |
| TraesCS3A01G069800.2 | Wheat | cytosol | 81.64 | 85.22 |
| HORVU3Hr1G012760.2 | Barley | cytosol | 34.26 | 72.45 |
| HORVU3Hr1G012650.19 | Barley | cytosol | 34.26 | 72.45 |
| HORVU3Hr1G012510.23 | Barley | cytosol | 75.49 | 72.16 |
| HORVU3Hr1G012800.1 | Barley | cytosol | 24.1 | 70.78 |
| HORVU3Hr1G012660.4 | Barley | cytosol | 72.72 | 67.91 |
| HORVU3Hr1G012610.1 | Barley | plastid | 21.23 | 67.43 |
| HORVU3Hr1G012620.2 | Barley | cytosol | 32.82 | 67.23 |
| HORVU3Hr1G012880.4 | Barley | cytosol | 46.26 | 65.65 |
| HORVU3Hr1G012340.8 | Barley | cytosol | 45.54 | 63.61 |
| Os11t0676800-00 | Rice | cytosol | 34.56 | 52.66 |
| KXG29105 | Sorghum | cytosol | 54.87 | 52.5 |
| Os11t0673900-00 | Rice | cytosol, plasma membrane | 44.0 | 51.5 |
| GSMUA_Achr2P11320_001 | Banana | cytosol | 37.64 | 36.02 |
| GSMUA_Achr1P14030_001 | Banana | cytosol | 34.87 | 32.23 |
| GSMUA_Achr1P14020_001 | Banana | cytosol | 33.95 | 32.1 |
| HORVU6Hr1G003130.1 | Barley | peroxisome | 8.72 | 31.6 |
| HORVU7Hr1G008120.1 | Barley | plastid | 7.49 | 31.2 |
| HORVU3Hr1G013250.2 | Barley | cytosol | 30.56 | 30.13 |
| HORVU5Hr1G122310.2 | Barley | cytosol | 27.18 | 29.58 |
| HORVU7Hr1G120540.3 | Barley | cytosol | 33.44 | 29.48 |
| HORVU3Hr1G013270.1 | Barley | cytosol | 29.64 | 29.25 |
| HORVU6Hr1G010110.1 | Barley | cytosol | 6.77 | 28.45 |
| HORVU4Hr1G000310.6 | Barley | cytosol | 27.49 | 27.77 |
| HORVU7Hr1G122420.3 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.85 | 27.06 |
| HORVU6Hr1G010100.1 | Barley | cytosol | 19.49 | 26.65 |
| HORVU7Hr1G122400.1 | Barley | cytosol | 21.33 | 26.0 |
| HORVU6Hr1G010000.1 | Barley | cytosol | 10.46 | 25.95 |
| HORVU2Hr1G127490.4 | Barley | cytosol | 26.67 | 25.1 |
| HORVU5Hr1G055260.1 | Barley | mitochondrion, plasma membrane | 14.15 | 24.78 |
| HORVU0Hr1G039660.8 | Barley | cytosol | 26.46 | 24.57 |
| VIT_04s0023g02380.t01 | Wine grape | cytosol | 20.72 | 23.76 |
| HORVU6Hr1G010040.1 | Barley | mitochondrion, plastid | 3.9 | 23.46 |
| PGSC0003DMT400067354 | Potato | cytosol | 21.03 | 23.43 |
| Solyc07g053020.1.1 | Tomato | cytosol | 20.31 | 23.24 |
| PGSC0003DMT400079012 | Potato | cytosol | 3.69 | 22.93 |
| AT3G50950.1 | Thale cress | cytosol | 20.0 | 22.89 |
| HORVU6Hr1G009990.1 | Barley | cytosol | 4.82 | 22.49 |
| HORVU4Hr1G000350.2 | Barley | cytosol, mitochondrion | 28.1 | 22.46 |
| HORVU6Hr1G010230.11 | Barley | cytosol, plastid | 12.51 | 22.1 |
| PGSC0003DMT400009065 | Potato | cytosol | 19.18 | 22.05 |
| Solyc07g053010.1.1 | Tomato | cytosol | 19.59 | 21.73 |
| Solyc02g084890.1.1 | Tomato | cytosol, extracellular, nucleus | 18.87 | 21.65 |
| PGSC0003DMT400067280 | Potato | cytosol, mitochondrion | 19.59 | 21.63 |
| HORVU1Hr1G083510.3 | Barley | cytosol | 18.05 | 21.18 |
| HORVU7Hr1G008100.2 | Barley | cytosol | 28.92 | 20.41 |
| HORVU1Hr1G040540.18 | Barley | mitochondrion | 28.41 | 18.33 |
| HORVU6Hr1G010220.1 | Barley | vacuole | 19.69 | 18.06 |
| HORVU4Hr1G079510.5 | Barley | endoplasmic reticulum, golgi, plastid | 13.85 | 15.9 |
| CDX73766 | Canola | plastid | 20.0 | 15.1 |
| Bra036845.1-P | Field mustard | plastid | 20.0 | 15.1 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G012860.1 | EnsemblPlantsGene:HORVU3Hr1G012860 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | PANTHER:PTHR44518 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000B47471C | UniProt:A0A287K4T5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr3H:-:27805908..27815549
Molecular Weight (calculated)
109987.0 Da
IEP (calculated)
6.537
GRAVY (calculated)
-0.094
Length
975 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAILESLLG SCVNKLQNII SDEAILILGV EEELVEVLRR VELIRCCIYD AEKRRTKELA VNNWLGQLRD VIYDVDEILD VARCKGSKLL PDHPSSSSKS
101: ASYKGLSVSS CFCNIGSRHD VAVRIRSLNK RIDNISKDTT FLTFSSSTQP TGNGPTSKLI RSSNLVEPNL VGKEIIHSSK KLVGLALAHK ENKSYKLAIV
201: GTGGVGKTTL AQKIFNDQKI KGSFKLHAWI CVSRDYNEVT ILKEVLRNIG VHHEQGETIA ELQRKLAETI EGKSFFLVLD DVWHPNVWTD LLRPPFHTTI
301: SGVILITTRD DQIAVRIGIQ HTHQVDLMSV EVTSSALASR DLTENEWRKF LGKYSGPHGM LSDDIEGVLY VSYDELPHRL KQCFLYCALY TEDSIMYRGV
401: ITKLWIAEGF IEEQQGQLLE DIAEGYYYEL IHRNLLQPDN TIFNQSQCRM HDLLRQLACK LSREECFIGD VETLRGENIL KLRRLSVVSK KDKLVLPSMD
501: NMAVKVRTFL AFYGPWRIED TLFKRFLLLR VLALNYSIVQ NIPDYIGKLI HLRLLDLGHT GISHLPESIG SLKNLQVLSL INCDALHILP LAITQLCNLR
601: CLRLTGTKVN QVPKGIGNLN LLTELRGFLV GDRSDNSDVQ DGWKLEELSS LPHMMYLNLV KLERTAHCRI NLVLADKKHL KELVLEWTAH GEGPYSEDVS
701: NAEKVFELLV PPRNLETLYI FGFCGKRYPT WFGTICLSSL THLFLKNLRS CVDLPPVGQL PNLKFLRIDG AQAVTKVGPE FVGYRMSEPI CNVFVAFPKL
801: EWFFIKDMPN WEEWSFLKEV GNVVDEGEDG DGEICNGDAQ STRLQLLPCL VKLKVEGCPK LSVLPRQLGD DTTSLKELLL IGANNLKAVE DLSILELLVI
901: EDCEGLEKVS NLPQVLKLQV RGCSNLSHVE GLGNLQQLGL GEDMQEISSR WVRELQNQHQ RLHGEDLDVY TLSTC
101: ASYKGLSVSS CFCNIGSRHD VAVRIRSLNK RIDNISKDTT FLTFSSSTQP TGNGPTSKLI RSSNLVEPNL VGKEIIHSSK KLVGLALAHK ENKSYKLAIV
201: GTGGVGKTTL AQKIFNDQKI KGSFKLHAWI CVSRDYNEVT ILKEVLRNIG VHHEQGETIA ELQRKLAETI EGKSFFLVLD DVWHPNVWTD LLRPPFHTTI
301: SGVILITTRD DQIAVRIGIQ HTHQVDLMSV EVTSSALASR DLTENEWRKF LGKYSGPHGM LSDDIEGVLY VSYDELPHRL KQCFLYCALY TEDSIMYRGV
401: ITKLWIAEGF IEEQQGQLLE DIAEGYYYEL IHRNLLQPDN TIFNQSQCRM HDLLRQLACK LSREECFIGD VETLRGENIL KLRRLSVVSK KDKLVLPSMD
501: NMAVKVRTFL AFYGPWRIED TLFKRFLLLR VLALNYSIVQ NIPDYIGKLI HLRLLDLGHT GISHLPESIG SLKNLQVLSL INCDALHILP LAITQLCNLR
601: CLRLTGTKVN QVPKGIGNLN LLTELRGFLV GDRSDNSDVQ DGWKLEELSS LPHMMYLNLV KLERTAHCRI NLVLADKKHL KELVLEWTAH GEGPYSEDVS
701: NAEKVFELLV PPRNLETLYI FGFCGKRYPT WFGTICLSSL THLFLKNLRS CVDLPPVGQL PNLKFLRIDG AQAVTKVGPE FVGYRMSEPI CNVFVAFPKL
801: EWFFIKDMPN WEEWSFLKEV GNVVDEGEDG DGEICNGDAQ STRLQLLPCL VKLKVEGCPK LSVLPRQLGD DTTSLKELLL IGANNLKAVE DLSILELLVI
901: EDCEGLEKVS NLPQVLKLQV RGCSNLSHVE GLGNLQQLGL GEDMQEISSR WVRELQNQHQ RLHGEDLDVY TLSTC
001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNM LSSFLKDANA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
401: FNDDNNNTCN NVLSLSFEEL PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
501: MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
601: KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL
701: NIKLIEETSL ETLAASIGGL KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR LEEDPMPILE KLLQLKELEL
801: GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS MPLLRTLDIQ IHCRL
101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRQKFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
401: FNDDNNNTCN NVLSLSFEEL PSYLKHCFLY LAHFPEDYEI KVENLSYYWA AEGIFQPRHY DGETIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
501: MMREVCLLKA KEENFLQITS SRPSTANLQS TVTSRRFVYQ YPTTLHVEKD INNPKLRALV VVTLGSWNLA GSSFTRLELL RVLDLIEVKI KGGKLASCIG
601: KLIHLRYLSL EYAEVTHIPY SLGNLKLLIY LNLASFGRST FVPNVLMGMQ ELRYLALPSD MGRKTKLELS NLVKLETLEN FSTENSSLED LCGMVRLSTL
701: NIKLIEETSL ETLAASIGGL KYLEKLEIYD HGSEMRTKEA GIVFDFVHLK RLWLKLYMPR LSTEQHFPSH LTTLYLESCR LEEDPMPILE KLLQLKELEL
801: GFESFSGKKM VCSSGGFPQL QRLSLLKLEE WEDWKVEESS MPLLRTLDIQ IHCRL
Arabidopsis Description
RDL5Probable disease resistance protein RF45 [Source:UniProtKB/Swiss-Prot;Acc:F4IBE4]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.