Factsheet for HORVU6Hr1G010000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G010110.1	Barley	cytosol	49.36	83.62
HORVU6Hr1G010040.1	Barley	mitochondrion, plastid	26.72	64.81
HORVU6Hr1G010230.11	Barley	cytosol, plastid	79.9	56.88
HORVU7Hr1G122420.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.29	36.24
HORVU3Hr1G012610.1	Barley	plastid	23.41	29.97
HORVU3Hr1G012760.2	Barley	cytosol	30.03	25.6
OQU82964	Sorghum	cytosol	57.25	25.11
HORVU3Hr1G012650.19	Barley	cytosol	29.26	24.95
HORVU4Hr1G000310.6	Barley	cytosol	57.76	23.52
HORVU3Hr1G012800.1	Barley	cytosol	19.85	23.49
EES08064	Sorghum	cytosol	59.03	22.72
KXG27854	Sorghum	cytosol	57.76	22.19
KXG27860	Sorghum	cytosol	58.52	22.18
Zm00001d024396_P001	Maize	plastid	60.31	22.09
KXG27846	Sorghum	cytosol	58.78	21.96
KXG27853	Sorghum	cytosol	59.8	20.47
KXG27844	Sorghum	cytosol	59.29	20.33
OQU82958	Sorghum	cytosol	58.52	20.07
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	56.74	18.28
HORVU2Hr1G127490.4	Barley	cytosol	45.29	17.18
HORVU7Hr1G008100.2	Barley	cytosol	52.67	14.98
HORVU3Hr1G013270.1	Barley	cytosol	30.03	11.94
HORVU3Hr1G013250.2	Barley	cytosol	29.52	11.73
HORVU3Hr1G012510.23	Barley	cytosol	30.03	11.57
HORVU7Hr1G120540.3	Barley	cytosol	29.77	10.58
HORVU3Hr1G012660.4	Barley	cytosol	27.99	10.54
HORVU5Hr1G122310.2	Barley	cytosol	23.92	10.49
HORVU3Hr1G012860.1	Barley	cytosol	25.95	10.46
HORVU7Hr1G122400.1	Barley	cytosol	17.56	8.62
HORVU0Hr1G039660.8	Barley	cytosol	22.9	8.57
HORVU6Hr1G010100.1	Barley	cytosol	12.98	7.15
HORVU1Hr1G040540.18	Barley	mitochondrion	23.66	6.15
HORVU1Hr1G083510.3	Barley	cytosol	7.38	3.49
HORVU3Hr1G012340.8	Barley	cytosol	5.6	3.15
HORVU3Hr1G012880.4	Barley	cytosol	4.58	2.62
HORVU6Hr1G010220.1	Barley	vacuole	6.11	2.26
HORVU7Hr1G008120.1	Barley	plastid	0.76	1.28
HORVU6Hr1G009990.1	Barley	cytosol	0.0	0.0
HORVU6Hr1G003130.1	Barley	peroxisome	0.0	0.0
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	0.0	0.0
HORVU4Hr1G079510.5	Barley	endoplasmic reticulum, golgi, plastid	0.0	0.0
HORVU3Hr1G012620.2	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G010000.1	EnsemblPlantsGene:HORVU6Hr1G010000	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR44851	PANTHER:PTHR44851:SF2
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	UniParc:UPI000B4755C3	UniProt:A0A287T9N7
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:17806671..17810586

Molecular Weight (calculated)

43805.3 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.109

Length

393 amino acids

Sequence
(BLAST)

001: MAMVLDAFAS YVQNMLSEMV SEEVHMLLGV RDEIDKMDIK LRDLKNFITD ADRRNITDKS VQEWLAQLKR AMYEAADILD LCQLKAMERG PSTADVGCFN
101: PLLFCMRNPS HAHDIGTRIK VLNKRLDTIK ERSAAFSFIS LGSYEDHGSK VHNFHSGNTG RETSGEFDRS GVVGEKIEQD TRKLVDIMLT EKEGNTNIMV
201: VAIVGVGGIG KTTLAQKVFN EETVRAEFDK MIWLSINQDF DKAELLRTVI TLAGGVHGGE KALAVLHPTL TTTLTGKKVF LVLDDMWSHR AWVDVLKTPL
301: ANIVSRGSRV LVTTRNESVA QGMNVVLPYH HVEKLEEEDA WSLLKKQIVS CEADVRQVDM LKVIGLKILA KCDGLPLAIK VMGGLLCQKE AKH

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.