Factsheet for HORVU6Hr1G010220.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	plasma membrane

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G003130.1	Barley	peroxisome	19.1	75.46
HORVU6Hr1G010100.1	Barley	cytosol	50.14	74.75
TraesCSU01G111600.1	Wheat	extracellular, plasma membrane	42.24	73.13
HORVU6Hr1G009990.1	Barley	cytosol	13.26	67.46
TraesCS6A01G052300.1	Wheat	extracellular, golgi	41.67	65.92
TraesCSU01G112000.1	Wheat	cytosol, endoplasmic reticulum	79.21	59.42
TraesCS6A01G052500.1	Wheat	cytosol	78.55	58.47
TraesCS6A01G052200.1	Wheat	cytosol	78.93	58.47
TraesCS6B01G069900.2	Wheat	cytosol	75.26	55.13
HORVU4Hr1G079510.5	Barley	endoplasmic reticulum, golgi, plastid	43.65	54.65
HORVU7Hr1G008120.1	Barley	plastid	11.76	53.42
TraesCSU01G111100.1	Wheat	cytosol	72.06	53.19
TraesCS6B01G069500.1	Wheat	cytosol	71.03	53.13
TraesCSU01G111000.1	Wheat	cytosol	71.21	53.09
TraesCS6A01G051900.4	Wheat	cytosol	71.4	52.71
TraesCS6B01G070500.2	Wheat	cytosol	69.61	51.97
TraesCSU01G110800.1	Wheat	cytosol	69.8	51.46
TraesCSU01G111400.1	Wheat	cytosol	69.71	51.24
TraesCS6B01G069400.2	Wheat	cytosol	69.24	50.97
TraesCS6A01G052400.1	Wheat	cytosol	57.2	50.5
HORVU1Hr1G083510.3	Barley	cytosol	37.54	48.01
HORVU7Hr1G122400.1	Barley	cytosol	35.94	47.75
TraesCSU01G111900.3	Wheat	cytosol	37.91	45.28
HORVU7Hr1G008100.2	Barley	cytosol	55.41	42.62
TraesCS6B01G070300.1	Wheat	cytosol	24.74	40.52
KXG27846	Sorghum	cytosol	36.59	36.98
KXG27844	Sorghum	cytosol	39.42	36.56
Zm00001d024396_P001	Maize	plastid	36.78	36.44
OQU82958	Sorghum	cytosol	38.76	35.95
KXG27853	Sorghum	cytosol	38.48	35.63
KXG27854	Sorghum	cytosol	34.15	35.48
EES08064	Sorghum	cytosol	33.87	35.26
HORVU4Hr1G000310.6	Barley	cytosol	31.23	34.4
KXG27860	Sorghum	cytosol	33.02	33.85
OQU82964	Sorghum	cytosol	28.5	33.82
HORVU3Hr1G012620.2	Barley	cytosol	13.64	30.46
HORVU4Hr1G000350.2	Barley	cytosol, mitochondrion	34.62	30.16
HORVU3Hr1G012880.4	Barley	cytosol	19.47	30.13
HORVU3Hr1G012340.8	Barley	cytosol	19.47	29.66
HORVU2Hr1G127490.4	Barley	cytosol	26.34	27.03
HORVU7Hr1G122420.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.86	24.57
HORVU5Hr1G055260.1	Barley	mitochondrion, plasma membrane	12.23	23.34
HORVU5Hr1G122310.2	Barley	cytosol	17.78	21.09
HORVU7Hr1G120540.3	Barley	cytosol	21.82	20.98
HORVU3Hr1G012510.23	Barley	cytosol	19.1	19.9
HORVU3Hr1G012660.4	Barley	cytosol	19.38	19.73
HORVU3Hr1G012860.1	Barley	cytosol	18.06	19.69
HORVU3Hr1G013270.1	Barley	cytosol	18.25	19.64
HORVU3Hr1G013250.2	Barley	cytosol	17.69	19.01
HORVU3Hr1G012800.1	Barley	cytosol	5.55	17.77
HORVU0Hr1G039660.8	Barley	cytosol	17.4	17.62
HORVU6Hr1G010230.11	Barley	cytosol, plastid	8.09	15.58
HORVU1Hr1G040540.18	Barley	mitochondrion	21.82	15.35
TraesCSU01G111500.2	Wheat	cytosol	5.36	12.53
HORVU3Hr1G012650.19	Barley	cytosol	4.05	9.33
HORVU3Hr1G012760.2	Barley	cytosol	3.57	8.24
HORVU3Hr1G012610.1	Barley	plastid	1.88	6.51
HORVU6Hr1G010000.1	Barley	cytosol	2.26	6.11
TraesCS6A01G051800.1	Wheat	cytosol	0.28	1.4
HORVU6Hr1G010040.1	Barley	mitochondrion, plastid	0.0	0.0
HORVU6Hr1G010110.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A287TA11	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:HARBI1_dom	EnsemblPlantsGene:HORVU6Hr1G010220	EnsemblPlants:HORVU6Hr1G010220.1	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_typical-subtyp	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13359
PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF872	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000B4653A6	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:18021242..18024883

Molecular Weight (calculated)

119927.0 Da

IEP (calculated)

5.574

GRAVY (calculated)

-0.172

Length

1063 amino acids

Sequence
(BLAST)

0001: MLKDIGVQIV GKCDGLPLAL KVMGGILCQK DKKQHEWKIV LDDSIWSISG IPEELNNAVY LSYEDLSSCA KQCFLHYSLL PKTAVFSRNE IIGMWISEGF
0101: LHGTLDDIEE LGSKYYKELI LRNLIEPNTV YVDQYVCNMH DVVRSFAQFV ARDEALAVHS GETNIVSKLS AHEFLRLSLE SKASESYGLE WSSLQAQKTL
0201: RALISTGYIN IKPGDSLVNF PCLQTLHIDS AHVVELLESL HELKHLRYLS LRETDISSLP DSIGNMKFLQ YISLFGCKQF VKLPGSIVKL GQLRYLNFNA
0301: TSIKGIPRGF CALTNLRVLL GFPAQVDGDC CSLEELGPLS QLKILDLDGL ENITTSSLAA KAKLADKVHL TTLVLNCGSI LGDDGLIKEE DCVSEEEQQQ
0401: MEKVFHELCP PPRLESLDMR GYFGRWPPRW MMSSSDVPLQ SLRILFIVDL ACCTQLPDGL CRLPYLEFIQ INCAPAIKCV GPEFMQSNNH YNARPAQMVA
0501: AFPRLHKMEL IRLVEWEEWD WEEQVQAFPV LQVLTLDRCK LKCLPPGLAS QARALNKLII SYVQGLISIE NFPSLVELDL DENLDLERIT NLPRLQKLTI
0601: EDCPKLKVLE GVPALQRLML TDKDMETLPI YMGGINPRHL ELCCRLALLA SIAAGQSGLE WDKFRHVGHV KAYAGEGGNS RKWYVLYTAK PYNLETNVSF
0701: SFMSRGTLSY FEDAQRFQFV FKMTRETFSY ICSLVMEPSM QDMNSYTFVN GRVLSLQDRV AVALRRLHSS EPTGIVGSSV GVNESTALSV TERFVDAMWE
0801: QADHHSSWPD CNEKDEIKSK FEKIHKMNNC CGVICATQIP FGPNWEKNKT TQMQVIVDPE MRFRNIWLGS AGSINHINIL YDSHLFNGCE KGGRLNGSKL
0901: KVALDGSEVG EYIIGDTGYP LLPWLLTPYQ EEDLSDTKAE FNRRHSAART CALKAMARLK DTWKCLQGEV WWPANLETLS KIIYACCRLH NIVIELEDDA
1001: AMLSTKRKNY SMEVREIAKE DAVRARDMLS QHFMASRSSK SGEQDDEAAS SGPGDENNEQ EVQ

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.