Factsheet for TraesCS6A01G051800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G566900.1	Wheat	cytosol	65.42	68.97
TraesCS7A01G567300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.74	61.83
TraesCS7A01G478400.1	Wheat	cytosol	68.22	50.87
TraesCS4A01G309500.4	Wheat	cytosol	61.22	32.59
HORVU6Hr1G010230.11	Barley	cytosol, plastid	83.64	32.43
TraesCS7A01G043200.1	Wheat	cytosol	50.47	27.91
TraesCS6A01G020600.1	Wheat	cytosol	53.27	21.63
TraesCS4A01G310200.1	Wheat	cytosol	58.88	14.81
OQU82964	Sorghum	cytosol	61.68	14.73
TraesCS3A01G068900.1	Wheat	cytosol	23.83	14.53
TraesCSU01G110800.1	Wheat	cytosol	97.2	14.42
TraesCS6A01G052400.1	Wheat	cytosol	78.97	14.04
TraesCS7A01G567200.2	Wheat	cytosol	68.69	13.89
EES08064	Sorghum	cytosol	63.55	13.32
TraesCS7A01G567400.1	Wheat	cytosol	65.89	13.2
KXG27854	Sorghum	cytosol	63.08	13.2
TraesCS7A01G333500.1	Wheat	cytosol, plastid	65.42	13.12
TraesCS6A01G415000.1	Wheat	cytosol	65.42	13.1
TraesCS6A01G052500.1	Wheat	cytosol	85.98	12.89
Zm00001d024396_P001	Maize	plastid	64.02	12.77
TraesCS6B01G069400.2	Wheat	cytosol	85.98	12.74
KXG27860	Sorghum	cytosol	61.68	12.73
KXG27846	Sorghum	cytosol	62.15	12.64
TraesCS6A01G051900.4	Wheat	cytosol	84.11	12.5
TraesCS6A01G052200.1	Wheat	cytosol	81.78	12.2
TraesCS7A01G566700.1	Wheat	cytosol	37.85	12.11
TraesCS3A01G068600.1	Wheat	cytosol	26.17	11.89
KXG27853	Sorghum	cytosol	62.62	11.67
KXG27844	Sorghum	cytosol	62.15	11.61
TraesCS5A01G036900.1	Wheat	cytosol	57.01	11.36
TraesCS3A01G068300.1	Wheat	cytosol, extracellular	24.3	11.18
OQU82958	Sorghum	cytosol	59.81	11.17
TraesCS7A01G568100.1	Wheat	cytosol, plasma membrane	72.43	10.82
TraesCS2A01G495600.1	Wheat	mitochondrion	54.21	10.11
TraesCS1A01G242300.1	Wheat	cytosol	48.13	9.87
TraesCS1A01G376600.1	Wheat	cytosol	55.61	9.7
TraesCS3A01G068500.2	Wheat	cytosol, extracellular	25.23	9.42
TraesCS3A01G069200.1	Wheat	extracellular	26.17	9.29
TraesCS5A01G292200.1	Wheat	cytosol	28.97	6.07
TraesCS7A01G374100.1	Wheat	cytosol	28.04	6.01
TraesCS3A01G068700.1	Wheat	cytosol	28.04	5.92
TraesCS3A01G069300.1	Wheat	cytosol	27.57	5.85
TraesCS3A01G069800.2	Wheat	cytosol	25.23	5.78
TraesCS3A01G068800.1	Wheat	cytosol, extracellular	25.23	5.31
TraesCS3A01G068200.1	Wheat	cytosol	24.77	5.21
TraesCS7A01G557700.2	Wheat	cytosol	23.83	4.67
TraesCS3A01G073800.1	Wheat	cytosol	21.03	4.55
TraesCS3A01G073700.1	Wheat	cytosol	20.56	4.46
TraesCS5A01G181400.1	Wheat	plastid	15.42	3.04
TraesCS7A01G567500.2	Wheat	mitochondrion, plastid	24.77	3.02
TraesCS5A01G181200.1	Wheat	mitochondrion	13.08	2.87
TraesCS3A01G044600.1	Wheat	cytosol	7.48	1.82
TraesCS7A01G568700.2	Wheat	mitochondrion	4.21	1.25
TraesCS5A01G533700.1	Wheat	cytosol	3.74	1.24
TraesCS7A01G566600.1	Wheat	extracellular, plasma membrane	1.4	1.17
TraesCS6A01G052300.1	Wheat	extracellular, golgi	1.87	0.6
TraesCS7A01G566500.1	Wheat	cytosol	1.4	0.52
TraesCS7A01G478300.1	Wheat	cytosol	1.4	0.48
TraesCS4A01G309600.1	Wheat	cytosol	1.4	0.44
TraesCS7A01G566800.1	Wheat	cytosol	1.4	0.32
HORVU6Hr1G010220.1	Barley	vacuole	1.4	0.28
TraesCS1A01G152300.1	Wheat	cytosol	0.47	0.07

Protein Annotations

EnsemblPlants:TraesCS6A01G051800.1	EnsemblPlantsGene:TraesCS6A01G051800	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR44851	PANTHER:PTHR44851:SF2
SEG:seg	TIGR:cd14798	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6A:+:26952147..26952878

Molecular Weight (calculated)

23888.8 Da

IEP (calculated)

5.691

GRAVY (calculated)

-0.225

Length

214 amino acids

Sequence
(BLAST)

001: MAMILDAFAY YVQNMLTEMV KEEVHMLLGV RDDIDKMDVK LGDLKNFLAD ADRRNITDKT VQEWVGQLKR AMYEAADILD VCQLKAMERG SSTVDVGCFN
101: PLLFCMRNPS HAHDIATRIK ALNKRLDTIK ERSAAFSFIN LGSYEDRSSK VHASHSGNTS REISGEFDRS GIVGEKIEED TRKLVEIMLT EKEGNANIMV
201: VAIVGVGGIG LRQG

Best Arabidopsis Sequence Match ( AT3G50950.1 )
(BLAST)

001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT

Arabidopsis Description

RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.