Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G566500.1 | Wheat | cytosol | 50.1 | 82.53 |
| TraesCS7A01G566600.1 | Wheat | extracellular, plasma membrane | 19.01 | 70.43 |
| TraesCS7A01G478300.1 | Wheat | cytosol | 43.07 | 65.6 |
| TraesCS7B01G489900.1 | Wheat | cytosol, endoplasmic reticulum | 87.08 | 58.42 |
| TraesCS7D01G544600.1 | Wheat | cytosol, endoplasmic reticulum | 55.25 | 52.34 |
| TraesCS7A01G567200.2 | Wheat | cytosol | 56.41 | 50.76 |
| TraesCS7A01G568100.1 | Wheat | cytosol, plasma membrane | 72.48 | 48.18 |
| TraesCS4A01G309600.1 | Wheat | cytosol | 33.93 | 47.15 |
| TraesCS6A01G052300.1 | Wheat | extracellular, golgi | 33.19 | 47.02 |
| TraesCS7A01G568700.2 | Wheat | mitochondrion | 33.72 | 44.71 |
| TraesCS7A01G567400.1 | Wheat | cytosol | 50.1 | 44.66 |
| TraesCS7A01G567500.2 | Wheat | mitochondrion, plastid | 75.95 | 41.17 |
| TraesCS6A01G052500.1 | Wheat | cytosol | 58.3 | 38.87 |
| TraesCS6A01G052200.1 | Wheat | cytosol | 57.77 | 38.33 |
| TraesCS6A01G051900.4 | Wheat | cytosol | 56.41 | 37.29 |
| TraesCS3A01G044600.1 | Wheat | cytosol | 34.03 | 36.9 |
| TraesCS7A01G566700.1 | Wheat | cytosol | 25.11 | 35.73 |
| TraesCS6A01G052400.1 | Wheat | cytosol | 45.17 | 35.71 |
| TraesCS6A01G415000.1 | Wheat | cytosol | 39.29 | 34.99 |
| TraesCS7A01G333500.1 | Wheat | cytosol, plastid | 36.76 | 32.8 |
| Zm00001d024396_P001 | Maize | plastid | 36.45 | 32.34 |
| KXG27846 | Sorghum | cytosol | 35.5 | 32.13 |
| TraesCS5A01G036900.1 | Wheat | cytosol | 35.5 | 31.47 |
| KXG27844 | Sorghum | cytosol | 37.71 | 31.33 |
| OQU82958 | Sorghum | cytosol | 37.6 | 31.24 |
| KXG27853 | Sorghum | cytosol | 36.87 | 30.57 |
| KXG27854 | Sorghum | cytosol | 32.04 | 29.81 |
| EES08064 | Sorghum | cytosol | 31.93 | 29.77 |
| KXG27860 | Sorghum | cytosol | 32.04 | 29.41 |
| OQU82964 | Sorghum | cytosol | 27.63 | 29.35 |
| TraesCS2A01G495600.1 | Wheat | mitochondrion | 33.93 | 28.16 |
| TraesCS1A01G376600.1 | Wheat | cytosol | 34.98 | 27.14 |
| TraesCS4A01G310200.1 | Wheat | cytosol | 23.42 | 26.2 |
| TraesCS1A01G242300.1 | Wheat | cytosol | 25.84 | 23.56 |
| TraesCS5A01G533700.1 | Wheat | cytosol | 12.92 | 19.07 |
| TraesCS3A01G068200.1 | Wheat | cytosol | 19.85 | 18.57 |
| TraesCS3A01G068800.1 | Wheat | cytosol, extracellular | 19.54 | 18.29 |
| TraesCS3A01G068700.1 | Wheat | cytosol | 19.43 | 18.26 |
| TraesCS3A01G069300.1 | Wheat | cytosol | 19.22 | 18.14 |
| TraesCS7A01G374100.1 | Wheat | cytosol | 19.01 | 18.14 |
| TraesCS5A01G292200.1 | Wheat | cytosol | 19.22 | 17.92 |
| TraesCS3A01G073800.1 | Wheat | cytosol | 18.07 | 17.39 |
| TraesCS5A01G181200.1 | Wheat | mitochondrion | 17.75 | 17.33 |
| TraesCS3A01G069800.2 | Wheat | cytosol | 16.81 | 17.13 |
| TraesCS7A01G557700.2 | Wheat | cytosol | 19.54 | 17.05 |
| TraesCS3A01G073700.1 | Wheat | cytosol | 17.54 | 16.92 |
| TraesCS5A01G181400.1 | Wheat | plastid | 18.49 | 16.24 |
| TraesCS1A01G152300.1 | Wheat | cytosol | 22.27 | 15.32 |
| TraesCS6A01G020600.1 | Wheat | cytosol | 7.04 | 12.71 |
| TraesCS3A01G069200.1 | Wheat | extracellular | 5.67 | 8.96 |
| TraesCS3A01G068500.2 | Wheat | cytosol, extracellular | 5.36 | 8.9 |
| TraesCS7A01G567300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 1.26 | 6.45 |
| TraesCS3A01G068600.1 | Wheat | cytosol | 3.15 | 6.37 |
| TraesCS3A01G068300.1 | Wheat | cytosol, extracellular | 2.52 | 5.16 |
| TraesCS6A01G051800.1 | Wheat | cytosol | 0.32 | 1.4 |
| TraesCS3A01G068900.1 | Wheat | cytosol | 0.32 | 0.85 |
| TraesCS7A01G043200.1 | Wheat | cytosol | 0.11 | 0.26 |
| TraesCS7A01G566900.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7A01G478400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS4A01G309500.4 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G566800.1 | EnsemblPlantsGene:TraesCS7A01G566800 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:HARBI1_dom | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | ncoils:Coil |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF872 | PFAM:PF00931 | PFAM:PF13359 | SEG:seg | SUPFAM:SSF52058 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:735841001..735844042
Molecular Weight (calculated)
108500.0 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.173
Length
952 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNELNHTVY LSYEYMPSYL KQCFLYYSLL PKSRIFTMDE VVAMWISEGF IHGNSNDLEE LGENYYKELV SRNLIEPDKS YVDLWVCSMH DVVRSFAQYM
101: TKDEALIAKD GDNDILAELS SQNFLRLSIE TNQSQSGELN WKCLQAQKSV RTLISTIQIK MKPGDSLATF SSLRTLHMKS ADMSILLESL HQLKHLRYLT
201: LVNVDVYVLP GNIGKMKLLQ FLDLGGCTKL VNLPDSIVKH DQLRLLSLPI ECMVPRGFSG LTNMRRLLQF RAHLDGDWCS LDELGPLSQL RVLVLTELEN
301: VSAASFAANA RISEKMHLIS LLLYCTSKLG DDGLLKEKEG VSEEEQQRIE KVLDKLCPPP GLEYLHIKGY FGRQLPSWMM TTSMVPLDNL KTLLIDDLAC
401: CTQLPNGLCH LPNLQLLQVS RAPCIKHVGT GFLQSASASF PRLNKMILAG MVEWEEWEWE KQVQAMRRLE KLVLNNCRLR HFPPGLASNA SSLKILILVH
501: VKHLSYIESF PSVVELRVNG CPDLERITSL PNLQKLTIMY CPKLKVLERI ASLERLILED YTMEELPEYL RDIKARHLQL FCRLWLLSAV AAGQSGTEWD
601: KFSQVEHVKA YARDGDNQRK WYVLYTRGDN CKLDSNISSS AIFEETLSSC MVDPQGFESV YKMRRSTFSY ICGLVRLPFL EDMMARDHTF VDGRVISLQD
701: RAATALRVLN SGEPPVVVGS SLGVNESTVS LVTQRLIEGI RERGLHHLNW PYHFQAMEKI KCRFDKIHGL PNCCGVVHRA YFKFGSPNLD HEENADTLMQ
801: AVVDSDMRFT NIWFGASSSM NQSSLLNDSW LFKSCEKGTL LDGSKLKVSD GSDVGEYIIG DAGYPLHSWL LTPYRLEDDI SDSKVEFNRR HSAATAMALR
901: ALERLKDTWK CLQGEGWHPN NQRDLWWTIR TCCRLHNIVI AMEEEGAVML SR
101: TKDEALIAKD GDNDILAELS SQNFLRLSIE TNQSQSGELN WKCLQAQKSV RTLISTIQIK MKPGDSLATF SSLRTLHMKS ADMSILLESL HQLKHLRYLT
201: LVNVDVYVLP GNIGKMKLLQ FLDLGGCTKL VNLPDSIVKH DQLRLLSLPI ECMVPRGFSG LTNMRRLLQF RAHLDGDWCS LDELGPLSQL RVLVLTELEN
301: VSAASFAANA RISEKMHLIS LLLYCTSKLG DDGLLKEKEG VSEEEQQRIE KVLDKLCPPP GLEYLHIKGY FGRQLPSWMM TTSMVPLDNL KTLLIDDLAC
401: CTQLPNGLCH LPNLQLLQVS RAPCIKHVGT GFLQSASASF PRLNKMILAG MVEWEEWEWE KQVQAMRRLE KLVLNNCRLR HFPPGLASNA SSLKILILVH
501: VKHLSYIESF PSVVELRVNG CPDLERITSL PNLQKLTIMY CPKLKVLERI ASLERLILED YTMEELPEYL RDIKARHLQL FCRLWLLSAV AAGQSGTEWD
601: KFSQVEHVKA YARDGDNQRK WYVLYTRGDN CKLDSNISSS AIFEETLSSC MVDPQGFESV YKMRRSTFSY ICGLVRLPFL EDMMARDHTF VDGRVISLQD
701: RAATALRVLN SGEPPVVVGS SLGVNESTVS LVTQRLIEGI RERGLHHLNW PYHFQAMEKI KCRFDKIHGL PNCCGVVHRA YFKFGSPNLD HEENADTLMQ
801: AVVDSDMRFT NIWFGASSSM NQSSLLNDSW LFKSCEKGTL LDGSKLKVSD GSDVGEYIIG DAGYPLHSWL LTPYRLEDDI SDSKVEFNRR HSAATAMALR
901: ALERLKDTWK CLQGEGWHPN NQRDLWWTIR TCCRLHNIVI AMEEEGAVML SR
001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA
Arabidopsis Description
Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.