Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G122420.3 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 50.45 | 78.85 |
| TraesCS7D01G544100.1 | Wheat | cytosol | 54.43 | 77.15 |
| TraesCS7D01G543900.1 | Wheat | endoplasmic reticulum | 36.32 | 77.0 |
| TraesCS7D01G465800.1 | Wheat | mitochondrion | 38.21 | 69.82 |
| TraesCS7B01G489900.1 | Wheat | cytosol, endoplasmic reticulum | 86.87 | 61.52 |
| TraesCS6D01G400300.1 | Wheat | cytosol | 32.34 | 60.07 |
| TraesCS7D01G544500.1 | Wheat | cytosol | 83.28 | 58.57 |
| TraesCS7D01G544300.1 | Wheat | cytosol | 81.89 | 58.0 |
| TraesCS7D01G465700.1 | Wheat | cytosol | 29.25 | 56.54 |
| TraesCS7D01G039000.1 | Wheat | cytosol | 29.15 | 56.13 |
| OQU82964 | Sorghum | cytosol | 49.75 | 55.8 |
| TraesCS7A01G566800.1 | Wheat | cytosol | 52.34 | 55.25 |
| KXG27854 | Sorghum | cytosol | 53.23 | 52.3 |
| EES08064 | Sorghum | cytosol | 53.03 | 52.2 |
| KXG27846 | Sorghum | cytosol | 54.13 | 51.71 |
| KXG27860 | Sorghum | cytosol | 52.94 | 51.3 |
| Zm00001d024396_P001 | Maize | plastid | 54.63 | 51.16 |
| TraesCS6D01G400700.2 | Wheat | cytosol | 37.11 | 51.1 |
| TraesCS6D01G400400.1 | Wheat | cytosol | 24.58 | 49.7 |
| TraesCS7D01G038900.1 | Wheat | cytosol | 8.76 | 48.35 |
| OQU82958 | Sorghum | cytosol | 55.12 | 48.34 |
| TraesCS7D01G525700.1 | Wheat | mitochondrion, plastid | 56.02 | 48.33 |
| KXG27844 | Sorghum | cytosol | 55.02 | 48.25 |
| TraesCS4D01G004100.1 | Wheat | cytosol | 50.85 | 47.94 |
| TraesCS1D01G383800.1 | Wheat | cytosol | 50.95 | 47.76 |
| TraesCS4D01G004200.1 | Wheat | cytosol | 49.95 | 47.18 |
| KXG27853 | Sorghum | cytosol | 53.73 | 47.04 |
| TraesCS2D01G495900.1 | Wheat | cytosol, plastid | 35.72 | 46.14 |
| TraesCS5D01G428900.1 | Wheat | cytosol | 31.44 | 45.6 |
| TraesCS3D01G036300.1 | Wheat | cytosol | 28.56 | 42.52 |
| TraesCS7D01G544000.1 | Wheat | cytosol | 36.82 | 40.35 |
| TraesCS2D01G567500.1 | Wheat | cytosol | 40.1 | 38.6 |
| TraesCS2D01G567200.1 | Wheat | cytosol | 27.76 | 38.01 |
| TraesCS3D01G528100.2 | Wheat | plasma membrane | 40.3 | 36.45 |
| TraesCS1D01G242200.1 | Wheat | cytosol | 21.39 | 36.01 |
| TraesCS7D01G436300.1 | Wheat | cytosol | 72.64 | 34.58 |
| TraesCS3D01G068200.1 | Wheat | cytosol | 18.61 | 30.61 |
| TraesCS3D01G073500.1 | Wheat | cytosol | 24.48 | 27.33 |
| TraesCS3D01G068100.1 | Wheat | extracellular | 27.66 | 27.23 |
| TraesCS3D01G073600.1 | Wheat | cytosol, mitochondrion, plasma membrane | 20.6 | 27.06 |
| TraesCS3D01G068800.1 | Wheat | cytosol | 26.47 | 27.01 |
| TraesCS7D01G544200.1 | Wheat | plasma membrane, plastid, vacuole | 17.11 | 26.96 |
| TraesCS7D01G552700.1 | Wheat | cytosol | 28.66 | 26.37 |
| TraesCS5D01G185700.1 | Wheat | plastid | 25.57 | 23.71 |
| TraesCS5D01G185600.1 | Wheat | cytosol | 24.68 | 23.66 |
| TraesCS1D01G149200.1 | Wheat | cytosol | 22.29 | 16.18 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G544600.1 | EnsemblPlantsGene:TraesCS7D01G544600 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF872 | PFAM:PF00931 | PRINTS:PR00364 |
| SEG:seg | SUPFAM:SSF52058 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7D:+:632141216..632145257
Molecular Weight (calculated)
112731.0 Da
IEP (calculated)
6.645
GRAVY (calculated)
-0.150
Length
1005 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAMVLDAFTS YVGHMLAQLA ADGVGTVLGV SGEIDKMADK LRDLKNFLAD ADRRNITDET VQEWVGQLKR AMYEATDILD LCQLKAMERG SSTTLDAGCF
0101: NPLLFCMRNP SHAHEIGTRI KKLNKRLDYI KERSAAFNFV NLGSYLDHSS NVRISHHGNP SRETVGDFDR SAIVGDKIEE DTRALVAQIM QTGKDVNNGI
0201: MVVAIVGVGG IGKTTLAQKV FNDEAIQRGF SKKIWLSVNQ NFNEVELLRR AIIGAGGNSQ LAGNAKDALH RALMQALKDH KTLLVMDDVW DNGAWEGVLK
0301: IPLANAAASG SRVLITTRDE RVAQGVTAIR PYHHVDTLVP DDAWLLLKKQ VCSSEIDEDH ISTLKDIGLK IVQKCGCLPI AVKVMGGLLR ERGGLHRDWQ
0401: QVLDDSKWAT TKMPNELNHT VYLSYEYMPS YLKQCFLYYS LLPKSRIFTK DEVVAMWISE GFIHGNSNDL EELGENYYKE LVSRNLIEPD KSYVDLWVCS
0501: MHDVVRSFAQ YMTKDEALVT QDGDNDILAK LGSQKFLRLS IETNRSQSGE LDWKSLQGQQ SVRTLISTVQ IKMKPGDSLV IFSSLRTLHI ESADVASLVE
0601: SLHQLKHMRY LALVNVDISV LPGNIGKMKL LQFLDLGGCT KLVNLPDSIV KLDQLRLLSL PIECMVPRGF SGLTNMRRLL QFRAHLDGDW CSLDELGPLS
0701: QLRVLVLTEL ENVSAASFAA NARLSEKMHL ISLLLYCTSK LGDDGLVKEK EGVSEEEQQR IEKVLDKLCP PPGLEYLHIK GYFGRQLPSW MMSTSMVPLD
0801: NLNTLLIDDL ACCTQLPNGL CQLPNLQLLQ VRRAPCIKHV GTGFLQVASA SFPSYIESFP SVVELIVNGC PDLERITNLP NLQKLTIMYC PKLKVLERIA
0901: SLERLVLKDY TMEKLPEYMR DIKPRHLQLF CRLWLLSAVV AGQSGTEWDK FSQVEHVKAY ARDGDNERKW YVLYTRGDNY KLDSNISSSA IFEGTENQTY
1001: VQAFS
0101: NPLLFCMRNP SHAHEIGTRI KKLNKRLDYI KERSAAFNFV NLGSYLDHSS NVRISHHGNP SRETVGDFDR SAIVGDKIEE DTRALVAQIM QTGKDVNNGI
0201: MVVAIVGVGG IGKTTLAQKV FNDEAIQRGF SKKIWLSVNQ NFNEVELLRR AIIGAGGNSQ LAGNAKDALH RALMQALKDH KTLLVMDDVW DNGAWEGVLK
0301: IPLANAAASG SRVLITTRDE RVAQGVTAIR PYHHVDTLVP DDAWLLLKKQ VCSSEIDEDH ISTLKDIGLK IVQKCGCLPI AVKVMGGLLR ERGGLHRDWQ
0401: QVLDDSKWAT TKMPNELNHT VYLSYEYMPS YLKQCFLYYS LLPKSRIFTK DEVVAMWISE GFIHGNSNDL EELGENYYKE LVSRNLIEPD KSYVDLWVCS
0501: MHDVVRSFAQ YMTKDEALVT QDGDNDILAK LGSQKFLRLS IETNRSQSGE LDWKSLQGQQ SVRTLISTVQ IKMKPGDSLV IFSSLRTLHI ESADVASLVE
0601: SLHQLKHMRY LALVNVDISV LPGNIGKMKL LQFLDLGGCT KLVNLPDSIV KLDQLRLLSL PIECMVPRGF SGLTNMRRLL QFRAHLDGDW CSLDELGPLS
0701: QLRVLVLTEL ENVSAASFAA NARLSEKMHL ISLLLYCTSK LGDDGLVKEK EGVSEEEQQR IEKVLDKLCP PPGLEYLHIK GYFGRQLPSW MMSTSMVPLD
0801: NLNTLLIDDL ACCTQLPNGL CQLPNLQLLQ VRRAPCIKHV GTGFLQVASA SFPSYIESFP SVVELIVNGC PDLERITNLP NLQKLTIMYC PKLKVLERIA
0901: SLERLVLKDY TMEKLPEYMR DIKPRHLQLF CRLWLLSAVV AGQSGTEWDK FSQVEHVKAY ARDGDNERKW YVLYTRGDNY KLDSNISSSA IFEGTENQTY
1001: VQAFS
001: MVDAVVTVFL EKTLNILEEK GRTVSDYRKQ LEDLQSELKY MQSFLKDAER QKRTNETLRT LVADLRELVY EAEDILVDCQ LADGDDGNEQ RSSNAWLSRL
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
101: HPARVPLQYK KSKRLQEINE RITKIKSQVE PYFEFITPSN VGRDNGTDRW SSPVYDHTQV VGLEGDKRKI KEWLFRSNDS QLLIMAFVGM GGLGKTTIAQ
201: EVFNDKEIEH RFERRIWVSV SQTFTEEQIM RSILRNLGDA SVGDDIGTLL RKIQQYLLGK RYLIVMDDVW DKNLSWWDKI YQGLPRGQGG SVIVTTRSES
301: VAKRVQARDD KTHRPELLSP DNSWLLFCNV AFAANDGTCE RPELEDVGKE IVTKCKGLPL TIKAVGGLLL CKDHVYHEWR RIAEHFQDEL RGNTSETDNV
401: MSSLQLSYDE LPSHLKSCIL TLSLYPEDCV IPKQQLVHGW IGEGFVMWRN GRSATESGED CFSGLTNRCL IEVVDKTYSG TIITCKIHDM VRDLVIDIAK
501: KDSFSNPEGL NCRHLGISGN FDEKQIKVNH KLRGVVSTTK TGEVNKLNSD LAKKFTDCKY LRVLDISKSI FDAPLSEILD EIASLQHLAC LSLSNTHPLI
601: QFPRSMEDLH NLQILDASYC QNLKQLQPCI VLFKKLLVLD MTNCGSLECF PKGIGSLVKL EVLLGFKPAR SNNGCKLSEV KNLTNLRKLG LSLTRGDQIE
701: EEELDSLINL SKLMSISINC YDSYGDDLIT KIDALTPPHQ LHELSLQFYP GKSSPSWLSP HKLPMLRYMS ICSGNLVKMQ EPFWGNENTH WRIEGLMLSS
801: LSDLDMDWEV LQQSMPYLRT VTANWCPELE SFAIEDVGFR GGVWMKTPLH RT
Arabidopsis Description
RPP13L4Disease resistance RPP13-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38834]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.