Factsheet for TraesCS7D01G544000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G465700.1	Wheat	cytosol	38.82	68.46
TraesCS7D01G544200.1	Wheat	plasma membrane, plastid, vacuole	46.56	66.93
TraesCS6D01G400400.1	Wheat	cytosol	32.17	59.36
TraesCS7D01G525700.1	Wheat	mitochondrion, plastid	73.28	57.68
TraesCS7A01G568700.2	Wheat	mitochondrion	38.17	48.75
TraesCS6D01G400700.2	Wheat	cytosol	35.66	44.79
TraesCS7D01G544500.1	Wheat	cytosol	69.79	44.79
TraesCS7D01G544300.1	Wheat	cytosol	67.94	43.9
TraesCS3D01G036300.1	Wheat	cytosol	30.53	41.48
TraesCS5D01G428900.1	Wheat	cytosol	31.08	41.13
TraesCS7D01G544600.1	Wheat	cytosol, endoplasmic reticulum	40.35	36.82
TraesCS2D01G495900.1	Wheat	cytosol, plastid	30.64	36.12
TraesCS7D01G436300.1	Wheat	cytosol	73.28	31.83
TraesCS1D01G242200.1	Wheat	cytosol	19.63	30.15
Zm00001d024396_P001	Maize	plastid	31.95	27.31
KXG27846	Sorghum	cytosol	31.19	27.19
KXG27844	Sorghum	cytosol	33.59	26.88
TraesCS2D01G567200.1	Wheat	cytosol	21.37	26.7
TraesCS4D01G004100.1	Wheat	cytosol	30.86	26.55
TraesCS4D01G004200.1	Wheat	cytosol	30.75	26.5
OQU82958	Sorghum	cytosol	32.93	26.35
KXG27853	Sorghum	cytosol	32.82	26.22
TraesCS1D01G383800.1	Wheat	cytosol	30.43	26.03
OQU82964	Sorghum	cytosol	24.1	24.67
EES08064	Sorghum	cytosol	27.37	24.58
KXG27854	Sorghum	cytosol	27.26	24.44
KXG27860	Sorghum	cytosol	26.39	23.34
TraesCS7D01G544100.1	Wheat	cytosol	16.79	21.72
TraesCS3D01G528100.2	Wheat	plasma membrane	23.34	19.26
TraesCS2D01G567500.1	Wheat	cytosol	21.48	18.87
TraesCS3D01G073600.1	Wheat	cytosol, mitochondrion, plasma membrane	14.94	17.91
TraesCS3D01G068800.1	Wheat	cytosol	16.25	15.13
TraesCS3D01G068100.1	Wheat	extracellular	16.58	14.89
TraesCS7D01G552700.1	Wheat	cytosol	17.34	14.56
TraesCS5D01G185600.1	Wheat	cytosol	15.81	13.84
TraesCS5D01G185700.1	Wheat	plastid	15.7	13.28
TraesCS1D01G149200.1	Wheat	cytosol	18.87	12.5
TraesCS3D01G073500.1	Wheat	cytosol	12.21	12.44
TraesCS3D01G068200.1	Wheat	cytosol	3.38	5.07
TraesCS6D01G400300.1	Wheat	cytosol	2.51	4.25
TraesCS7D01G039000.1	Wheat	cytosol	1.74	3.07
TraesCS7D01G465800.1	Wheat	mitochondrion	0.87	1.45
TraesCS7D01G543900.1	Wheat	endoplasmic reticulum	0.0	0.0
TraesCS7D01G038900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G544000.1	EnsemblPlantsGene:TraesCS7D01G544000	Gene3D:3.80.10.10	InterPro:HARBI1_dom	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR22930	PANTHER:PTHR22930:SF85	PFAM:PF13359	SEG:seg	SUPFAM:SSF52058	MapMan:35.1

Description

No Description!

Coordinates

chr7D:+:632020979..632024254

Molecular Weight (calculated)

104068.0 Da

IEP (calculated)

5.932

GRAVY (calculated)

-0.173

Length

917 amino acids

Sequence
(BLAST)

001: MHDVIRSFAQ YMIKDEALIV HDGDIDNLTK LHSQKFLRLS IETNRLQSGD IDWKSLQEQK SVRTLISTIQ IKMKPSDLLV TFSGLRILHI ESVDVAALVE
101: SLHQLKHLRY VALLNTDISV LPVNFDKMKL LQFLRLDGCK NLLNLPDSIV KLGQLRLLDL PSRCMIPRGF CGLTNMRRLH GFRAHMDGDW CSLDELGPLS
201: QLRFLELIHL ENVSAASFAA NARLGEKIHL IDVFLYCTSK LGDDGLVKEK EGVSEEEQQQ IEKVFDELYP PPSVEFIHID GYFGQLLPSW MMSTSKVSLN
301: NLKFLTFSDL ACCKQLPNGL CQLPYLQFFQ VARAPCIRRV GTRFLQAVAT PFPSLKEMSF REMVEWEEWE WEEQVQAMPR LEKLWLINCK LRRAPPGLAS
401: NAMALKVLYV HDVQHLSYLE NFPSVIELTV VRSLDLERIT NLPNLQKLTI TICPKLKVLG SIPALDRLVL EDYTMETLPE YMRGIKPKHF QLFCRPWLLS
501: SVAMGQSGPE WDKFSHVEHV KAYSPDGDNQ RKWYVLYTRR DNFKLDSNIS CSSVFEGTLS SCMVDAQGFE SVYKMRRSTF NYICSLVRVP FFEDMMATDH
601: TFVDGGALSL QDRVALALVM LNSGKPPVTV GSSLGVNEST VSLVTQVFVE AMWERALHHF SWPGSARMEM IKRKFDRIHG LPNCCGVVHT THIKFGSQNC
701: DHEEYADTLM QAVVDPDMRF TNTRFRLSGS MMNQLGVLHD SDLFKMGEDG SCLNGSKLKL SDGSDVGEYI IGAAGYPLRP WLLTPYHDLS DTDSKLEFDR
801: RIHSATTAVA LRALARLKGT WKCLQGEGWH PNDQRDVFLT IHTCCMLHNI VIDMEEEEEV GAGMPSDQED NYIEQVRRVA DEDAIGVRDA LSQHLIASGE
901: EEQEAVVASG PGDENKE

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.