Factsheet for TraesCS7D01G544200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

nucleus 1
plastid 3
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G544000.1	Wheat	cytosol	66.93	46.56
TraesCS7D01G465700.1	Wheat	cytosol	32.29	39.62
TraesCS7D01G525700.1	Wheat	mitochondrion, plastid	67.71	37.08
TraesCS7D01G544500.1	Wheat	cytosol	81.5	36.39
TraesCS6D01G400400.1	Wheat	cytosol	26.02	33.4
TraesCS7D01G544300.1	Wheat	cytosol	65.05	29.25
TraesCS6D01G400700.2	Wheat	cytosol	25.71	22.47
TraesCS7A01G567200.2	Wheat	cytosol	34.8	20.98
TraesCS7D01G436300.1	Wheat	cytosol	68.18	20.61
TraesCS5D01G428900.1	Wheat	cytosol	21.16	19.48
TraesCS3D01G036300.1	Wheat	cytosol	18.97	17.93
TraesCS7D01G544600.1	Wheat	cytosol, endoplasmic reticulum	26.96	17.11
TraesCS2D01G495900.1	Wheat	cytosol, plastid	20.38	16.71
TraesCS1D01G242200.1	Wheat	cytosol	13.48	14.41
KXG27844	Sorghum	cytosol	24.76	13.79
KXG27853	Sorghum	cytosol	24.76	13.76
OQU82958	Sorghum	cytosol	24.45	13.61
KXG27846	Sorghum	cytosol	22.1	13.4
Zm00001d024396_P001	Maize	plastid	22.26	13.23
TraesCS4D01G004200.1	Wheat	cytosol	20.53	12.31
TraesCS4D01G004100.1	Wheat	cytosol	20.38	12.2
TraesCS1D01G383800.1	Wheat	cytosol	20.38	12.13
TraesCS2D01G567200.1	Wheat	cytosol	13.64	11.85
EES08064	Sorghum	cytosol	17.4	10.87
KXG27854	Sorghum	cytosol	17.08	10.65
TraesCS3D01G528100.2	Wheat	plasma membrane	18.34	10.53
KXG27860	Sorghum	cytosol	15.99	9.84
TraesCS3D01G073600.1	Wheat	cytosol, mitochondrion, plasma membrane	10.19	8.5
TraesCS2D01G567500.1	Wheat	cytosol	13.64	8.33
OQU82964	Sorghum	cytosol	11.6	8.26
TraesCS1D01G149200.1	Wheat	cytosol	16.46	7.59
TraesCS3D01G073500.1	Wheat	cytosol	10.03	7.11
TraesCS5D01G185600.1	Wheat	cytosol	11.6	7.06
TraesCS7D01G552700.1	Wheat	cytosol	11.91	6.96
TraesCS3D01G068100.1	Wheat	extracellular	11.13	6.95
TraesCS3D01G068800.1	Wheat	cytosol	10.5	6.8
TraesCS5D01G185700.1	Wheat	plastid	11.13	6.55
TraesCS7D01G465800.1	Wheat	mitochondrion	1.41	1.64
TraesCS7D01G038900.1	Wheat	cytosol	0.16	0.55
TraesCS7B01G491800.1	Wheat	cytosol	0.16	0.38
TraesCS7D01G544100.1	Wheat	cytosol	0.31	0.28
TraesCS7D01G543900.1	Wheat	endoplasmic reticulum	0.16	0.21
TraesCS7D01G039000.1	Wheat	cytosol	0.16	0.19
TraesCS6D01G400300.1	Wheat	cytosol	0.16	0.18
TraesCS3D01G068200.1	Wheat	cytosol	0.0	0.0
HORVU7Hr1G122420.3	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G544200.1	EnsemblPlantsGene:TraesCS7D01G544200	Gene3D:3.80.10.10	InterPro:HARBI1_dom	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR22930	PANTHER:PTHR22930:SF85	PFAM:PF13359	SEG:seg	SUPFAM:SSF52047	MapMan:35.1

Description

No Description!

Coordinates

chr7D:+:632036472..632038730

Molecular Weight (calculated)

71990.4 Da

IEP (calculated)

5.818

GRAVY (calculated)

-0.215

Length

638 amino acids

Sequence
(BLAST)

001: MMGYFGQQLP IWMLSTSMVP FNNLKFIGFS DLACCTQLPN GLCQLPNLQF LQVSRAPCIK HVGTGFVQAT TASFPRLNTL RLFDMVEWGE WEWEEQVQAM
101: RRLEELVLSK CRLRHVPPGL ASNASSLKML SLLHIKQLSN IESFPSVVEL FVNDCPDLER ITNLPNLQKL TIYNCPKLKV LEHIASLERL VVKDYTMEKL
201: PEYMRDIKAR HLQLFCRLWL LSAVAAGQSG TEWDKFSHME HVKAYAGDGD NQRKWYVLYM RGDNCKLDSN ISNSTIFEET LSPSMVDAQG FDSLYKVRRS
301: TLSYVCSLVR IPFFEDMTAR EPTFVDGRVL SLQDRVAVAL RVLNSGDSPV TVGSSLGVNE STVSLVTQVF VEAMCDRAMH HCSWPGSTKM EKIKHKFDKI
401: HGLPNCCGVV HTYHITFGSQ NPDHEENDVV LMQAIVDSDM RLMEFWFGGD LLESIEKYAW LNGGKVKLSD GSEVGEYIIG DAGYPLRPWL LTRYQLENGL
501: SLSESKVEFN RRHSAATAVA GRSLTRLKDT WKWLQGEGWH PNNRRVMNRI VGACCMLHNI VIDLEGDEGA SMPSGQEDIY AEKAWKLADE DAVRVRDALS
601: QHLIGSEVHT MAAEEEEEAV AAVAICSGDG NKEEEARQ

Best Arabidopsis Sequence Match ( AT3G55350.1 )
(BLAST)

001: MGPIKTIKKK KRAEKKVDRN VLLAATAAAT SASAAAALNN NDDDDDSSSQ SLDWWDGFSR RIYGGSTDPK TFESVFKISR KTFDYICSLV KADFTAKPAN
101: FSDSNGNPLS LNDRVAVALR RLGSGESLSV IGETFGMNQS TVSQITWRFV ESMEERAIHH LSWPSKLDEI KSKFEKISGL PNCCGAIDIT HIVMNLPAVE
201: PSNKVWLDGE KNFSMTLQAV VDPDMRFLDV IAGWPGSLND DVVLKNSGFY KLVEKGKRLN GEKLPLSERT ELREYIVGDS GFPLLPWLLT PYQGKPTSLP
301: QTEFNKRHSE ATKAAQMALS KLKDRWRIIN GVMWMPDRNR LPRIIFVCCL LHNIIIDMED QTLDDQPLSQ QHDMNYRQRS CKLADEASSV LRDELSDQLC
401: GKNSSA

Arabidopsis Description

Protein ALP1-like [Source:UniProtKB/Swiss-Prot;Acc:Q9M2U3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.