Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G400700.2 | Wheat | cytosol | 54.83 | 52.05 |
| TraesCS6D01G400400.1 | Wheat | cytosol | 37.09 | 51.71 |
| TraesCS7D01G465700.1 | Wheat | cytosol | 34.92 | 46.54 |
| TraesCS3D01G036300.1 | Wheat | cytosol | 45.31 | 46.52 |
| TraesCS2D01G495900.1 | Wheat | cytosol, plastid | 49.78 | 44.34 |
| TraesCS1D01G242200.1 | Wheat | cytosol | 33.91 | 39.36 |
| TraesCS2D01G567200.1 | Wheat | cytosol | 37.23 | 35.15 |
| KXG27846 | Sorghum | cytosol | 52.24 | 34.41 |
| Zm00001d024396_P001 | Maize | plastid | 52.96 | 34.2 |
| TraesCS1D01G383800.1 | Wheat | cytosol | 51.37 | 33.21 |
| TraesCS4D01G004200.1 | Wheat | cytosol | 49.93 | 32.52 |
| TraesCS4D01G004100.1 | Wheat | cytosol | 49.93 | 32.46 |
| KXG27844 | Sorghum | cytosol | 53.39 | 32.29 |
| OQU82958 | Sorghum | cytosol | 52.96 | 32.02 |
| EES08064 | Sorghum | cytosol | 46.61 | 31.64 |
| KXG27854 | Sorghum | cytosol | 46.61 | 31.57 |
| KXG27853 | Sorghum | cytosol | 52.09 | 31.45 |
| TraesCS7D01G544600.1 | Wheat | cytosol, endoplasmic reticulum | 45.6 | 31.44 |
| TraesCS7D01G525700.1 | Wheat | mitochondrion, plastid | 52.53 | 31.24 |
| TraesCS7D01G544000.1 | Wheat | cytosol | 41.13 | 31.08 |
| OQU82964 | Sorghum | cytosol | 39.39 | 30.47 |
| KXG27860 | Sorghum | cytosol | 44.73 | 29.89 |
| TraesCS5B01G422400.1 | Wheat | cytosol | 77.92 | 28.78 |
| TraesCS7D01G544100.1 | Wheat | cytosol | 25.97 | 25.39 |
| TraesCS2D01G567500.1 | Wheat | cytosol | 37.81 | 25.1 |
| TraesCS7D01G544500.1 | Wheat | cytosol | 50.94 | 24.7 |
| TraesCS7D01G544300.1 | Wheat | cytosol | 48.05 | 23.47 |
| TraesCS3D01G073600.1 | Wheat | cytosol, mitochondrion, plasma membrane | 25.11 | 22.75 |
| TraesCS3D01G528100.2 | Wheat | plasma membrane | 35.93 | 22.41 |
| TraesCS7D01G544200.1 | Wheat | plasma membrane, plastid, vacuole | 19.48 | 21.16 |
| TraesCS3D01G068800.1 | Wheat | cytosol | 28.43 | 20.0 |
| TraesCS7D01G552700.1 | Wheat | cytosol | 31.02 | 19.69 |
| TraesCS3D01G068100.1 | Wheat | extracellular | 27.85 | 18.9 |
| TraesCS6D01G400300.1 | Wheat | cytosol | 14.29 | 18.3 |
| TraesCS3D01G073500.1 | Wheat | cytosol | 23.67 | 18.22 |
| TraesCS7D01G436300.1 | Wheat | cytosol | 52.96 | 17.39 |
| TraesCS7D01G039000.1 | Wheat | cytosol | 12.99 | 17.24 |
| TraesCS5D01G185600.1 | Wheat | cytosol | 25.83 | 17.08 |
| TraesCS5D01G185700.1 | Wheat | plastid | 26.55 | 16.97 |
| TraesCS7D01G465800.1 | Wheat | mitochondrion | 11.54 | 14.55 |
| TraesCS7D01G543900.1 | Wheat | endoplasmic reticulum | 9.67 | 14.13 |
| TraesCS1D01G149200.1 | Wheat | cytosol | 26.98 | 13.51 |
| TraesCS3D01G068200.1 | Wheat | cytosol | 11.11 | 12.6 |
| TraesCS7D01G038900.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G428900.1 | EnsemblPlantsGene:TraesCS5D01G428900 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_typical-subtyp | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF872 | PFAM:PF00931 | SEG:seg | SMART:SM00369 | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:486250776..486252923
Molecular Weight (calculated)
78848.2 Da
IEP (calculated)
4.955
GRAVY (calculated)
-0.093
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNNTHETEL DELKDIGLQI IANCGGLPLA IKVMGGVLSV RHVQRPDWMR VLNDFIPSCE LPEVINHSVY LSYEDLAPCL KQCFLHYSLL PTNAVFYEND
101: IVGMWISEGF IHGNSHDYWR DSEDLGSEYY RELILRNLIE PDARDEALVA HNGDMYGYLS SRKFYQLSLE SKELESDMLV WSLVQEQTSL RTLVSIGQIK
201: LKPGDSLMAF PSPRTLHIES TNAAVLVESL CQLKHLRYLS VAHTDVSSLP ENINTMKFLQ HINLQGCESF EKLPDSIIKL EQLRYLNLND TGINVIPRGF
301: CILTNLSKLY GFPAYMDGNW CSLEELWPLS RLKEIELKGL DNVAAGLFAE SASLYQMRLS YLKLECSTRV GGGGLVIEGR SVFQDEENQR IEAVFDELHP
401: PQRLSTLVIQ GYFGLQLPVW MRTEDRLECL VVLTMEDLAC CTQLPCCLSQ LPYLEVLKIQ RAPAISCVGP EFLGVSEHHD QTAIMFPRLH ELVFSGMVKW
501: EEWVWEKQLN AMPALEELLV DNCKLRSFPP GLAFRARALR RLVVTAAQNL NSLDSFASVV ELDVYFSPTL TSIANLHQLQ KLTIIFCPKL EKLIGVPAIR
601: RLVLEDYDME TLPRYLQDVG NLSLLQLDCS LELLTSIAMG QPGPEWKKYS HVKHVEAYAH DGDNQREWYV LYTKDPYKFE TNINQRSSKL AGN
101: IVGMWISEGF IHGNSHDYWR DSEDLGSEYY RELILRNLIE PDARDEALVA HNGDMYGYLS SRKFYQLSLE SKELESDMLV WSLVQEQTSL RTLVSIGQIK
201: LKPGDSLMAF PSPRTLHIES TNAAVLVESL CQLKHLRYLS VAHTDVSSLP ENINTMKFLQ HINLQGCESF EKLPDSIIKL EQLRYLNLND TGINVIPRGF
301: CILTNLSKLY GFPAYMDGNW CSLEELWPLS RLKEIELKGL DNVAAGLFAE SASLYQMRLS YLKLECSTRV GGGGLVIEGR SVFQDEENQR IEAVFDELHP
401: PQRLSTLVIQ GYFGLQLPVW MRTEDRLECL VVLTMEDLAC CTQLPCCLSQ LPYLEVLKIQ RAPAISCVGP EFLGVSEHHD QTAIMFPRLH ELVFSGMVKW
501: EEWVWEKQLN AMPALEELLV DNCKLRSFPP GLAFRARALR RLVVTAAQNL NSLDSFASVV ELDVYFSPTL TSIANLHQLQ KLTIIFCPKL EKLIGVPAIR
601: RLVLEDYDME TLPRYLQDVG NLSLLQLDCS LELLTSIAMG QPGPEWKKYS HVKHVEAYAH DGDNQREWYV LYTKDPYKFE TNINQRSSKL AGN
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.