Factsheet for TraesCS6D01G400300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G069700.2	Wheat	cytosol	66.36	62.65
TraesCS7D01G543900.1	Wheat	endoplasmic reticulum	54.71	62.45
TraesCS7D01G039000.1	Wheat	cytosol	58.6	60.73
TraesCS7D01G465800.1	Wheat	mitochondrion	54.53	53.64
TraesCS7D01G038900.1	Wheat	cytosol	16.64	49.45
TraesCS7D01G544100.1	Wheat	cytosol	63.03	48.1
OQU82964	Sorghum	cytosol	55.27	33.37
TraesCS7D01G544600.1	Wheat	cytosol, endoplasmic reticulum	60.07	32.34
EES08064	Sorghum	cytosol	56.93	30.17
Zm00001d024396_P001	Maize	plastid	59.15	29.82
KXG27854	Sorghum	cytosol	56.38	29.81
KXG27860	Sorghum	cytosol	56.93	29.7
KXG27846	Sorghum	cytosol	56.19	28.9
TraesCS4D01G004100.1	Wheat	cytosol	56.56	28.71
TraesCS4D01G004200.1	Wheat	cytosol	55.64	28.29
TraesCS1D01G383800.1	Wheat	cytosol	54.71	27.61
KXG27853	Sorghum	cytosol	57.12	26.92
KXG27844	Sorghum	cytosol	56.56	26.7
OQU82958	Sorghum	cytosol	56.38	26.61
TraesCS3D01G068200.1	Wheat	cytosol	29.94	26.51
TraesCS6D01G400700.2	Wheat	cytosol	33.83	25.07
TraesCS2D01G567500.1	Wheat	cytosol	45.29	23.47
HORVU6Hr1G003130.1	Barley	peroxisome	11.28	22.68
TraesCS7D01G544500.1	Wheat	cytosol	59.7	22.6
TraesCS7D01G544300.1	Wheat	cytosol	58.96	22.48
TraesCS3D01G528100.2	Wheat	plasma membrane	43.25	21.06
TraesCS2D01G495900.1	Wheat	cytosol, plastid	26.99	18.77
TraesCS3D01G073500.1	Wheat	cytosol	28.28	17.0
TraesCS2D01G567200.1	Wheat	cytosol	22.37	16.48
TraesCS7D01G552700.1	Wheat	cytosol	32.72	16.21
TraesCS3D01G068100.1	Wheat	extracellular	29.76	15.77
TraesCS3D01G068800.1	Wheat	cytosol	28.65	15.74
TraesCS7D01G436300.1	Wheat	cytosol	59.52	15.25
TraesCS5D01G428900.1	Wheat	cytosol	18.3	14.29
TraesCS7D01G525700.1	Wheat	mitochondrion, plastid	29.39	13.65
TraesCS5D01G185700.1	Wheat	plastid	25.69	12.82
TraesCS3D01G073600.1	Wheat	cytosol, mitochondrion, plasma membrane	17.74	12.55
TraesCS1D01G242200.1	Wheat	cytosol	13.12	11.89
TraesCS3D01G036300.1	Wheat	cytosol	14.79	11.85
TraesCS5D01G185600.1	Wheat	cytosol	22.92	11.83
TraesCS1D01G149200.1	Wheat	cytosol	17.01	6.65
TraesCS7D01G544000.1	Wheat	cytosol	4.25	2.51
TraesCS7D01G465700.1	Wheat	cytosol	0.92	0.96
TraesCS6D01G400400.1	Wheat	cytosol	0.37	0.4
TraesCS7D01G544200.1	Wheat	plasma membrane, plastid, vacuole	0.18	0.16

Protein Annotations

EnsemblPlants:TraesCS6D01G400300.1	EnsemblPlantsGene:TraesCS6D01G400300	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR44851
PANTHER:PTHR44851:SF2	PFAM:PF00931	PRINTS:PR00364	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chr6D:+:470096737..470098901

Molecular Weight (calculated)

60256.5 Da

IEP (calculated)

6.081

GRAVY (calculated)

-0.138

Length

541 amino acids

Sequence
(BLAST)

001: MAIVLDAFAS YVADMLKQVV EDEVGMLLGV TGQIDKMGVK LGDLKKFLAD AERRRITDTS VQGWVTELKR AMYDATDILD ICQLKAMDHH AASRMGCCNP
101: LLFCLRNPLF AHEIGTRIRA LNQKLDAIKE RSAAFGFNLA SYEDSCSKVH SSRLSTSREK SWELDRSGVV GEKIEEDTRA LVEIMVRRTE AETSNADNNR
201: VMVFAIVGVG GIGKTTLARE VFNDEAINAN FDKKIWLSVN QDFDKVELLR TAITLAGGKH RSEKALAVLR PILSDALTGK KIFLVMDDVW SHEACGDVLE
301: TPLNAVARGS RVLVTTRDTR VARGVKAVLP YHHIDKLDDE DAWSLLRKQV ISSETDGPEV DMLKDIGLQI AVKCGGLPLA VKVMGGLLCQ KDKQRHEWNM
401: VLNDSIWSAS EMPEELNYSI YLSYEDLPPS IKQCFLYYSL LPKSAAWSKN GSIGMWISEG FLHGTSADLE ELGSKYYKEL ILRNLIEPVT IWSDQQVCSM
501: HDVVRSFAQF VARDEALAAH SGDTGFISKL SAHKFLQNQM G

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.